Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_35320 |
Symbol | |
ID | 8635165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 3944563 |
End bp | 3945312 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | short-chain dehydrogenase of unknown substrate specificity |
Protein accession | YP_003316254 |
Protein GI | 269796799 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.135035 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.316469 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACAG CACTCATCAC CGGCGCGAGC GCCGGGCTCG GCGTCGAGTT CGCCTGGCAG CTCGCGACCG GGCACCACGA CCTCGTCCTC GTCGCCCGCG ACACCGAGCG GCTCGAGCGG CTGGCCCACC AGATCCGTTC CGCCGCCGGG GTCGACGTGG AGGTGCTCGG GGCCGACCTC TCCGACCGCG AGCAGACCGA GCGCGTTGCC GAGCGGCTGC GCAGCACCGA GCGCCCCGTG AGCCTGCTCG TCAACAACGC CGGGTACGCC GTCCACGACC GCTTCCTGGC AGGCGACGTC GCCGATCAGG AGGCGTCGCT CGACGTCATG GTCCGTGCCG TGCTCGTGCT GTCCCACGCT GCGGCGGGGG CGATGCGCTC GCGGTCCCGC GGCGCGATCC TCAACGTCTC GTCGGTCGCG GCGCTCACCG CGTCGGGGAC GTACTCCGCC CACAAGGCCT GGGTGCGGAC CTTCACCGAG GGGCTCGCCG TCGACCTGCG CGGCACCGGC GTCACCGCGA CCGCACTGTG CCCCGGCCTG ACCCGGACCG AGTTCCACGA GCGGGCGCAG CTCGACTACT CGTCCTTCCC CGCGGTCGCC TGGCTCGACG CCGGTGCCGT CGTCACCGCC GCCCTGCGCG ACGTCCGCCG CGGCGCCGTC ATCTCCACCC CGTCGATCCG GTACCGGCTC GCCGCCGGCC TCCTCCGCCT CGCCCCGAGG TCAGCCGTCC GCGCCGCCGA AGCCCGCTGA
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Protein sequence | MATALITGAS AGLGVEFAWQ LATGHHDLVL VARDTERLER LAHQIRSAAG VDVEVLGADL SDREQTERVA ERLRSTERPV SLLVNNAGYA VHDRFLAGDV ADQEASLDVM VRAVLVLSHA AAGAMRSRSR GAILNVSSVA ALTASGTYSA HKAWVRTFTE GLAVDLRGTG VTATALCPGL TRTEFHERAQ LDYSSFPAVA WLDAGAVVTA ALRDVRRGAV ISTPSIRYRL AAGLLRLAPR SAVRAAEAR
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