Gene Sked_35320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_35320 
Symbol 
ID8635165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3944563 
End bp3945312 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content75% 
IMG OID 
Productshort-chain dehydrogenase of unknown substrate specificity 
Protein accessionYP_003316254 
Protein GI269796799 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.135035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.316469 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACAG CACTCATCAC CGGCGCGAGC GCCGGGCTCG GCGTCGAGTT CGCCTGGCAG 
CTCGCGACCG GGCACCACGA CCTCGTCCTC GTCGCCCGCG ACACCGAGCG GCTCGAGCGG
CTGGCCCACC AGATCCGTTC CGCCGCCGGG GTCGACGTGG AGGTGCTCGG GGCCGACCTC
TCCGACCGCG AGCAGACCGA GCGCGTTGCC GAGCGGCTGC GCAGCACCGA GCGCCCCGTG
AGCCTGCTCG TCAACAACGC CGGGTACGCC GTCCACGACC GCTTCCTGGC AGGCGACGTC
GCCGATCAGG AGGCGTCGCT CGACGTCATG GTCCGTGCCG TGCTCGTGCT GTCCCACGCT
GCGGCGGGGG CGATGCGCTC GCGGTCCCGC GGCGCGATCC TCAACGTCTC GTCGGTCGCG
GCGCTCACCG CGTCGGGGAC GTACTCCGCC CACAAGGCCT GGGTGCGGAC CTTCACCGAG
GGGCTCGCCG TCGACCTGCG CGGCACCGGC GTCACCGCGA CCGCACTGTG CCCCGGCCTG
ACCCGGACCG AGTTCCACGA GCGGGCGCAG CTCGACTACT CGTCCTTCCC CGCGGTCGCC
TGGCTCGACG CCGGTGCCGT CGTCACCGCC GCCCTGCGCG ACGTCCGCCG CGGCGCCGTC
ATCTCCACCC CGTCGATCCG GTACCGGCTC GCCGCCGGCC TCCTCCGCCT CGCCCCGAGG
TCAGCCGTCC GCGCCGCCGA AGCCCGCTGA
 
Protein sequence
MATALITGAS AGLGVEFAWQ LATGHHDLVL VARDTERLER LAHQIRSAAG VDVEVLGADL 
SDREQTERVA ERLRSTERPV SLLVNNAGYA VHDRFLAGDV ADQEASLDVM VRAVLVLSHA
AAGAMRSRSR GAILNVSSVA ALTASGTYSA HKAWVRTFTE GLAVDLRGTG VTATALCPGL
TRTEFHERAQ LDYSSFPAVA WLDAGAVVTA ALRDVRRGAV ISTPSIRYRL AAGLLRLAPR
SAVRAAEAR