More than 300 homologs were found in PanDaTox collection
for query gene Mrad2831_4718 on replicon NC_010505
Organism: Methylobacterium radiotolerans JCM 2831



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010505  Mrad2831_4718  short-chain dehydrogenase/reductase SDR  100 
 
 
270 aa  539  9.999999999999999e-153  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  62.22 
 
 
271 aa  334  9e-91  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  59.09 
 
 
265 aa  315  3e-85  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  57.52 
 
 
271 aa  308  6.999999999999999e-83  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  58.33 
 
 
266 aa  306  2.0000000000000002e-82  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  57.03 
 
 
281 aa  306  2.0000000000000002e-82  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  58.56 
 
 
270 aa  306  2.0000000000000002e-82  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  57.03 
 
 
281 aa  306  2.0000000000000002e-82  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  57.85 
 
 
266 aa  306  3e-82  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  57.2 
 
 
266 aa  305  6e-82  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  58.62 
 
 
266 aa  303  1.0000000000000001e-81  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  57.41 
 
 
270 aa  303  2.0000000000000002e-81  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  57.2 
 
 
266 aa  302  4.0000000000000003e-81  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_011368  Rleg2_5185  short-chain dehydrogenase/reductase SDR  57.69 
 
 
285 aa  301  6.000000000000001e-81  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  56.32 
 
 
265 aa  299  3e-80  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  56.82 
 
 
266 aa  298  6e-80  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  57.04 
 
 
270 aa  298  6e-80  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  58.24 
 
 
265 aa  298  9e-80  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  58.17 
 
 
266 aa  293  3e-78  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5531  short-chain dehydrogenase/reductase SDR  53.82 
 
 
269 aa  292  4e-78  Sinorhizobium medicae WSM419  Bacteria  normal  0.356237  normal  0.14087 
 
 
-
 
NC_012858  Rleg_6849  short-chain dehydrogenase/reductase SDR  52.11 
 
 
269 aa  284  1.0000000000000001e-75  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.674583 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  54.75 
 
 
264 aa  278  9e-74  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  56.3 
 
 
271 aa  275  5e-73  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_0082  short-chain dehydrogenase/reductase SDR  56.98 
 
 
269 aa  275  7e-73  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  57.75 
 
 
262 aa  272  3e-72  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  57.3 
 
 
266 aa  271  7e-72  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  56.98 
 
 
262 aa  267  1e-70  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  56.98 
 
 
263 aa  266  2e-70  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  49.24 
 
 
265 aa  256  2e-67  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_010511  M446_3566  short-chain dehydrogenase/reductase SDR  57.84 
 
 
269 aa  255  4e-67  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.138362 
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  50.57 
 
 
265 aa  251  6e-66  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  50.19 
 
 
265 aa  251  7e-66  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0887  short-chain dehydrogenase/reductase SDR  49.05 
 
 
266 aa  250  2e-65  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  51.71 
 
 
264 aa  246  4e-64  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_007908  Rfer_0308  short-chain dehydrogenase/reductase SDR  48.3 
 
 
266 aa  243  1.9999999999999999e-63  Rhodoferax ferrireducens T118  Bacteria  normal  0.130238  n/a   
 
 
-
 
NC_007948  Bpro_2349  short-chain dehydrogenase/reductase SDR  49.25 
 
 
266 aa  243  1.9999999999999999e-63  Polaromonas sp. JS666  Bacteria  normal  0.341044  normal 
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  51.33 
 
 
264 aa  243  3e-63  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_012792  Vapar_5551  short-chain dehydrogenase/reductase SDR  50 
 
 
266 aa  236  4e-61  Variovorax paradoxus S110  Bacteria  normal  0.614615  n/a   
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  47.89 
 
 
267 aa  235  5.0000000000000005e-61  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  49.62 
 
 
262 aa  231  1e-59  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  47.86 
 
 
260 aa  230  2e-59  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  48.86 
 
 
269 aa  228  7e-59  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  47.08 
 
 
260 aa  226  2e-58  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  48.11 
 
 
262 aa  224  9e-58  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  48.11 
 
 
262 aa  224  1e-57  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  46.54 
 
 
261 aa  222  4.9999999999999996e-57  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  46.56 
 
 
262 aa  218  7e-56  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  43.46 
 
 
260 aa  218  1e-55  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  44.87 
 
 
264 aa  215  7e-55  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  45.04 
 
 
264 aa  214  9.999999999999999e-55  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2989  short chain dehydrogenase/reductase family oxidoreductase  45.42 
 
 
264 aa  214  9.999999999999999e-55  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0851531 
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  46.09 
 
 
267 aa  213  2.9999999999999995e-54  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_009621  Smed_5566  short-chain dehydrogenase/reductase SDR  53.09 
 
 
199 aa  206  3e-52  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0343056 
 
 
-
 
NC_012912  Dd1591_3491  short-chain dehydrogenase/reductase SDR  43.56 
 
 
287 aa  204  1e-51  Dickeya zeae Ech1591  Bacteria  normal  0.210779  n/a   
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  45.35 
 
 
262 aa  204  1e-51  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B0958  Short-chain dehydrogenase/reductase SDR  45.38 
 
 
263 aa  197  2.0000000000000003e-49  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5779  short-chain dehydrogenase/reductase SDR  45.63 
 
 
268 aa  197  2.0000000000000003e-49  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00272439 
 
 
-
 
NC_011071  Smal_2007  short-chain dehydrogenase/reductase SDR  45.74 
 
 
262 aa  194  9e-49  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.511264  normal 
 
 
-
 
NC_010338  Caul_0512  short-chain dehydrogenase/reductase SDR  42.97 
 
 
269 aa  187  2e-46  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  41.9 
 
 
257 aa  184  2.0000000000000003e-45  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4444  short-chain dehydrogenase/reductase SDR  52.12 
 
 
264 aa  178  9e-44  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.241971  normal 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  42.15 
 
 
253 aa  158  9e-38  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  37.59 
 
 
283 aa  155  7e-37  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  40.87 
 
 
269 aa  152  4e-36  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  42.92 
 
 
259 aa  152  5e-36  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  40.35 
 
 
269 aa  149  4e-35  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  35 
 
 
271 aa  149  4e-35  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  39.22 
 
 
296 aa  149  7e-35  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  36.89 
 
 
255 aa  146  3e-34  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  38.57 
 
 
267 aa  142  7e-33  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  40.09 
 
 
250 aa  139  3.9999999999999997e-32  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  38.22 
 
 
262 aa  138  1e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  39.46 
 
 
252 aa  134  9.999999999999999e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  35.17 
 
 
261 aa  134  1.9999999999999998e-30  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  40.09 
 
 
253 aa  134  1.9999999999999998e-30  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_009675  Anae109_3974  short-chain dehydrogenase/reductase SDR  37.5 
 
 
264 aa  132  3.9999999999999996e-30  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.036497  normal  0.609933 
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  40.27 
 
 
249 aa  132  5e-30  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_013131  Caci_6716  short-chain dehydrogenase/reductase SDR  34.47 
 
 
259 aa  132  6e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.543445  normal 
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  38.43 
 
 
259 aa  132  6e-30  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  36.24 
 
 
262 aa  132  9e-30  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  41.62 
 
 
263 aa  131  1.0000000000000001e-29  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  34.75 
 
 
261 aa  131  1.0000000000000001e-29  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009338  Mflv_0244  short-chain dehydrogenase/reductase SDR  38.26 
 
 
258 aa  131  1.0000000000000001e-29  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  35.81 
 
 
266 aa  130  2.0000000000000002e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  39.74 
 
 
250 aa  130  2.0000000000000002e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_008726  Mvan_0661  short-chain dehydrogenase/reductase SDR  38.26 
 
 
258 aa  130  2.0000000000000002e-29  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.381329 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  36.24 
 
 
266 aa  129  3e-29  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  40.43 
 
 
258 aa  130  3e-29  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  39.13 
 
 
262 aa  129  4.0000000000000003e-29  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  34.06 
 
 
262 aa  129  4.0000000000000003e-29  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  39.13 
 
 
262 aa  129  4.0000000000000003e-29  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4085  short-chain dehydrogenase/reductase SDR  34.34 
 
 
267 aa  128  9.000000000000001e-29  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4161  short-chain dehydrogenase/reductase SDR  34.34 
 
 
267 aa  128  9.000000000000001e-29  Mycobacterium sp. KMS  Bacteria  normal  0.209625  normal 
 
 
-
 
NC_014151  Cfla_2979  short-chain dehydrogenase/reductase SDR  38.2 
 
 
269 aa  128  9.000000000000001e-29  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8408  short-chain dehydrogenase/reductase SDR  38.89 
 
 
254 aa  127  1.0000000000000001e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.485174  normal 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  36.44 
 
 
258 aa  127  1.0000000000000001e-28  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  39.13 
 
 
262 aa  128  1.0000000000000001e-28  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  34.81 
 
 
273 aa  127  1.0000000000000001e-28  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  38.93 
 
 
267 aa  127  2.0000000000000002e-28  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_009077  Mjls_0469  short-chain dehydrogenase/reductase SDR  37.12 
 
 
258 aa  127  2.0000000000000002e-28  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
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