Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_0129 |
Symbol | |
ID | 7090445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 124189 |
End bp | 125004 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643463463 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002360473 |
Protein GI | 217976326 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAATA ACGGACAAAA GGGCGTCGCG CTGATCACCG GCGGCTCCGC GGGCATCGGC GCCGTCTATG CGGATCGACT GGCCAAGCGC GGCTATGATC TCATTCTGGT CGCGCGCAAT CAGGCGCGGC TCGACGCGCT GGCCGAGCGG TTGCGGGGCG AAACCGGTCG CTCTGTCGAA ACGATCGCGG CGAGCCTTGG CGATCGGAAC GATCTCGCCC GTGTCGAAGC CAGACTCTGC GAGGAGACTC GCCTGACGCT GCTCGTCAAC AATGCCGGGG TGGGCGCTGT GACGCCCCTG CTGCAATCCG ATGTCGACAA GATGGAGCAG ATGATCACCT TGAACGTCAC CGCGCTGACC CGGCTGACCT ATGCCGCAGC GCCCGGTTTC GTCGCGCGGG GCTCGGGCGC CATCATCAAT ATCGCCTCGG TCGTCGCCAT TGCGCCGGAA TCCCTGAACG GCGTCTACGG CGCGACCAAA GCCTTTGTCC TGGCGCTTAG TCTTTCGCTT CAGCATGAAC TGGCCGCGAA AGGGCTCCGC GTTCAGGCGG TGCTGCCGGG GGCGACGGCC ACGGAGTTTT GGGAGATCGC GGGTCTCCCG CACCAGAATC TGCCGGAGGG GATGGTGATG ACGGCGGAAG ATATGGTCGA CGCCGCGCTG GCGGGCTTTG ACCAGGGCGA ACTGGTCACC ATCCCGGCGC TGCTGGACAT AGCGGAATGG GATGCGTTCG AGGCGGCGCG CCGGGCGATG TCGCCCAAGC TGTCGCGCAC GACGCCGGCC GATCGGTACC GGTTAGCGGA AGCTCACGCC GGCTGA
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Protein sequence | MTNNGQKGVA LITGGSAGIG AVYADRLAKR GYDLILVARN QARLDALAER LRGETGRSVE TIAASLGDRN DLARVEARLC EETRLTLLVN NAGVGAVTPL LQSDVDKMEQ MITLNVTALT RLTYAAAPGF VARGSGAIIN IASVVAIAPE SLNGVYGATK AFVLALSLSL QHELAAKGLR VQAVLPGATA TEFWEIAGLP HQNLPEGMVM TAEDMVDAAL AGFDQGELVT IPALLDIAEW DAFEAARRAM SPKLSRTTPA DRYRLAEAHA G
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