More than 300 homologs were found in PanDaTox collection
for query gene CPF_0353 on replicon NC_008261
Organism: Clostridium perfringens ATCC 13124



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  100 
 
 
265 aa  546  1e-154  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  98.49 
 
 
265 aa  540  9.999999999999999e-153  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1655  short-chain dehydrogenase/reductase SDR  35.47 
 
 
272 aa  180  2e-44  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  34.66 
 
 
262 aa  178  1e-43  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  32.94 
 
 
266 aa  174  9.999999999999999e-43  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  32.55 
 
 
266 aa  172  3.9999999999999995e-42  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  34.68 
 
 
262 aa  161  9e-39  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_008541  Arth_0289  short-chain dehydrogenase/reductase SDR  32.52 
 
 
258 aa  157  2e-37  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  34.24 
 
 
258 aa  156  3e-37  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_013174  Jden_2426  short-chain dehydrogenase/reductase SDR  34.5 
 
 
269 aa  156  4e-37  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.316114 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  34.41 
 
 
253 aa  155  5.0000000000000005e-37  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  39.42 
 
 
255 aa  155  6e-37  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1536  short-chain dehydrogenase/reductase SDR  35.97 
 
 
260 aa  155  8e-37  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_25790  short-chain dehydrogenase of unknown substrate specificity  33.72 
 
 
282 aa  154  1e-36  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  31.5 
 
 
250 aa  154  1e-36  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  35.71 
 
 
263 aa  154  2e-36  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  31.05 
 
 
269 aa  153  2.9999999999999998e-36  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  34.15 
 
 
296 aa  152  4e-36  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  33.2 
 
 
263 aa  152  5e-36  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  32.57 
 
 
264 aa  149  4e-35  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_013521  Sked_35320  short-chain dehydrogenase of unknown substrate specificity  31.56 
 
 
249 aa  148  7e-35  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.135035  normal  0.316469 
 
 
-
 
NC_002947  PP_0429  short chain dehydrogenase/reductase family oxidoreductase  33.99 
 
 
260 aa  147  2.0000000000000003e-34  Pseudomonas putida KT2440  Bacteria  normal  normal  0.406504 
 
 
-
 
NC_009512  Pput_0462  short-chain dehydrogenase/reductase SDR  33.99 
 
 
260 aa  147  2.0000000000000003e-34  Pseudomonas putida F1  Bacteria  normal  0.767614  hitchhiker  0.00534124 
 
 
-
 
NC_004578  PSPTO_0601  oxidoreductase, short chain dehydrogenase/reductase family  30.98 
 
 
258 aa  147  2.0000000000000003e-34  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4572  Short-chain dehydrogenase/reductase SDR  31.76 
 
 
258 aa  147  2.0000000000000003e-34  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0459  short-chain dehydrogenase/reductase SDR  33.99 
 
 
260 aa  147  2.0000000000000003e-34  Pseudomonas putida GB-1  Bacteria  normal  normal  0.240703 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  32.52 
 
 
261 aa  147  2.0000000000000003e-34  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_013515  Smon_1006  short-chain dehydrogenase/reductase SDR  38 
 
 
257 aa  145  5e-34  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  31.97 
 
 
258 aa  145  7.0000000000000006e-34  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_012917  PC1_2681  short-chain dehydrogenase/reductase SDR  32.13 
 
 
261 aa  145  7.0000000000000006e-34  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  31.4 
 
 
252 aa  145  8.000000000000001e-34  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_011879  Achl_3992  short-chain dehydrogenase/reductase SDR  32.68 
 
 
251 aa  145  9e-34  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.608737 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  32.11 
 
 
261 aa  144  1e-33  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  31.4 
 
 
258 aa  145  1e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_009441  Fjoh_3794  short-chain dehydrogenase/reductase SDR  33.33 
 
 
262 aa  144  2e-33  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_3329  short-chain dehydrogenase/reductase SDR  30.8 
 
 
256 aa  143  2e-33  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.227726  hitchhiker  0.00265893 
 
 
-
 
NC_013132  Cpin_4109  short-chain dehydrogenase/reductase SDR  32.82 
 
 
269 aa  143  3e-33  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00421935 
 
 
-
 
NC_008228  Patl_0906  short-chain dehydrogenase/reductase SDR  33.33 
 
 
273 aa  143  3e-33  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.127379  n/a   
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  31.58 
 
 
260 aa  142  4e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  33.07 
 
 
264 aa  142  4e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  31.45 
 
 
267 aa  142  5e-33  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  30.2 
 
 
269 aa  142  7e-33  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  32.5 
 
 
267 aa  141  8e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_011059  Paes_0281  short-chain dehydrogenase/reductase SDR  32.27 
 
 
255 aa  141  9.999999999999999e-33  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000634692  hitchhiker  0.00117931 
 
 
-
 
NC_006368  lpp1382  hypothetical protein  31.35 
 
 
259 aa  141  9.999999999999999e-33  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_011886  Achl_0516  short-chain dehydrogenase/reductase SDR  32.92 
 
 
263 aa  141  9.999999999999999e-33  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_006369  lpl1378  hypothetical protein  30.95 
 
 
259 aa  140  1.9999999999999998e-32  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013235  Namu_5163  short-chain dehydrogenase/reductase SDR  32.66 
 
 
258 aa  140  1.9999999999999998e-32  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3647  short-chain dehydrogenase/reductase SDR  30.56 
 
 
255 aa  140  1.9999999999999998e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_3131  short-chain dehydrogenase/reductase SDR  31.47 
 
 
258 aa  139  3e-32  Pedobacter heparinus DSM 2366  Bacteria  normal  0.859893  normal 
 
 
-
 
NC_009338  Mflv_0244  short-chain dehydrogenase/reductase SDR  31.3 
 
 
258 aa  140  3e-32  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_1556  short-chain dehydrogenase/reductase SDR  30.52 
 
 
261 aa  139  3.9999999999999997e-32  Pectobacterium wasabiae WPP163  Bacteria  normal  0.596662  n/a   
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  33.46 
 
 
253 aa  139  4.999999999999999e-32  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  31.72 
 
 
257 aa  139  4.999999999999999e-32  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  29.84 
 
 
262 aa  139  4.999999999999999e-32  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
NC_010501  PputW619_4774  short-chain dehydrogenase/reductase SDR  33.2 
 
 
260 aa  139  6e-32  Pseudomonas putida W619  Bacteria  normal  normal  0.45506 
 
 
-
 
NC_008255  CHU_3621  short-chain dehydrogenase  30.95 
 
 
258 aa  139  7e-32  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_4770  short-chain dehydrogenase/reductase SDR  30.77 
 
 
266 aa  138  7.999999999999999e-32  Caulobacter sp. K31  Bacteria  normal  normal  0.228735 
 
 
-
 
NC_013517  Sterm_2330  short-chain dehydrogenase/reductase SDR  35.8 
 
 
257 aa  138  8.999999999999999e-32  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000620196  n/a   
 
 
-
 
NC_009953  Sare_1619  short-chain dehydrogenase/reductase SDR  30.71 
 
 
271 aa  137  1e-31  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.61951 
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  30.74 
 
 
264 aa  137  1e-31  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  32 
 
 
250 aa  137  1e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_013203  Apar_0041  short-chain dehydrogenase/reductase SDR  31.52 
 
 
257 aa  137  2e-31  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  30.16 
 
 
273 aa  136  4e-31  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  30.64 
 
 
264 aa  135  5e-31  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  32.9 
 
 
271 aa  135  6.0000000000000005e-31  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  31.82 
 
 
249 aa  135  7.000000000000001e-31  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_008726  Mvan_0661  short-chain dehydrogenase/reductase SDR  30.89 
 
 
258 aa  135  7.000000000000001e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.381329 
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  31.13 
 
 
267 aa  135  8e-31  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_009784  VIBHAR_05256  short-chain dehydrogenase/reductase SDR  32.81 
 
 
259 aa  135  9e-31  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_8408  short-chain dehydrogenase/reductase SDR  33.07 
 
 
254 aa  134  9.999999999999999e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.485174  normal 
 
 
-
 
NC_008261  CPF_2906  short chain dehydrogenase/reductase family oxidoreductase  34.38 
 
 
257 aa  134  1.9999999999999998e-30  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2321  dehydrogenase/reductase oxidoreductase protein  30.36 
 
 
275 aa  132  5e-30  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.195083 
 
 
-
 
NC_008392  Bamb_6118  short-chain dehydrogenase/reductase SDR  31.17 
 
 
275 aa  132  6e-30  Burkholderia ambifaria AMMD  Bacteria  normal  0.304156  normal  0.200034 
 
 
-
 
NC_013202  Hmuk_1178  short-chain dehydrogenase/reductase SDR  29.76 
 
 
259 aa  131  9e-30  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.82399  normal 
 
 
-
 
NC_009077  Mjls_4315  short-chain dehydrogenase/reductase SDR  27.17 
 
 
267 aa  131  1.0000000000000001e-29  Mycobacterium sp. JLS  Bacteria  normal  normal  0.294207 
 
 
-
 
NC_014248  Aazo_3911  short-chain dehydrogenase/reductase SDR  32.94 
 
 
267 aa  131  1.0000000000000001e-29  'Nostoc azollae' 0708  Bacteria  normal  0.322734  n/a   
 
 
-
 
NC_013530  Xcel_3148  short-chain dehydrogenase/reductase SDR  29.07 
 
 
259 aa  131  1.0000000000000001e-29  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_2448  short-chain dehydrogenase/reductase SDR  30.27 
 
 
257 aa  130  2.0000000000000002e-29  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0887  short-chain dehydrogenase/reductase SDR  31.12 
 
 
266 aa  130  2.0000000000000002e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  29.77 
 
 
271 aa  129  4.0000000000000003e-29  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_008146  Mmcs_0480  short-chain dehydrogenase/reductase SDR  31.05 
 
 
258 aa  129  4.0000000000000003e-29  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0491  short-chain dehydrogenase/reductase SDR  31.05 
 
 
258 aa  129  4.0000000000000003e-29  Mycobacterium sp. KMS  Bacteria  normal  normal  0.354983 
 
 
-
 
NC_009077  Mjls_0469  short-chain dehydrogenase/reductase SDR  31.05 
 
 
258 aa  129  6e-29  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  30.35 
 
 
264 aa  129  7.000000000000001e-29  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_2864  short-chain dehydrogenase/reductase SDR  31.98 
 
 
289 aa  127  1.0000000000000001e-28  Opitutus terrae PB90-1  Bacteria  normal  normal  0.327148 
 
 
-
 
NC_013501  Rmar_1809  short-chain dehydrogenase/reductase SDR  30.95 
 
 
263 aa  128  1.0000000000000001e-28  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  31.5 
 
 
255 aa  127  1.0000000000000001e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_008146  Mmcs_4085  short-chain dehydrogenase/reductase SDR  26.77 
 
 
267 aa  128  1.0000000000000001e-28  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4161  short-chain dehydrogenase/reductase SDR  26.77 
 
 
267 aa  128  1.0000000000000001e-28  Mycobacterium sp. KMS  Bacteria  normal  0.209625  normal 
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  34.36 
 
 
266 aa  128  1.0000000000000001e-28  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4948  short-chain dehydrogenase/reductase SDR  29.8 
 
 
253 aa  127  2.0000000000000002e-28  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.623441 
 
 
-
 
NC_007413  Ava_2965  Short-chain dehydrogenase/reductase SDR  32.3 
 
 
293 aa  127  2.0000000000000002e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4423  short-chain dehydrogenase/reductase SDR  30.8 
 
 
276 aa  127  2.0000000000000002e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.235547  n/a   
 
 
-
 
NC_010338  Caul_0512  short-chain dehydrogenase/reductase SDR  33.33 
 
 
269 aa  127  2.0000000000000002e-28  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_2585  short chain dehydrogenase/reductase family oxidoreductase  34.24 
 
 
257 aa  127  3e-28  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2349  short-chain dehydrogenase/reductase SDR  29.11 
 
 
266 aa  126  4.0000000000000003e-28  Polaromonas sp. JS666  Bacteria  normal  0.341044  normal 
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  30.13 
 
 
283 aa  125  5e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0274  short chain dehydrogenase/reductase family protein  31.73 
 
 
259 aa  125  6e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_1611  short-chain dehydrogenase/reductase SDR  30.35 
 
 
262 aa  125  7e-28  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
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