More than 300 homologs were found in PanDaTox collection
for query gene Ndas_5378 on replicon NC_014211
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014211  Ndas_5378  short-chain dehydrogenase/reductase SDR  100 
 
 
277 aa  545  1e-154  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0176  putative short chain dehydrogenase  52.1 
 
 
240 aa  222  6e-57  Thermobifida fusca YX  Bacteria  normal  0.300232  n/a   
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  46.77 
 
 
258 aa  180  2e-44  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  43.56 
 
 
259 aa  177  2e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  44.31 
 
 
250 aa  165  9e-40  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  42.54 
 
 
296 aa  162  5.0000000000000005e-39  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_013235  Namu_5163  short-chain dehydrogenase/reductase SDR  41.44 
 
 
258 aa  156  3e-37  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  40.84 
 
 
253 aa  154  2e-36  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  39.1 
 
 
269 aa  154  2e-36  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  41.47 
 
 
253 aa  152  5e-36  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  39.61 
 
 
252 aa  150  3e-35  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_013174  Jden_2426  short-chain dehydrogenase/reductase SDR  39.92 
 
 
269 aa  150  3e-35  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.316114 
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  40 
 
 
269 aa  150  3e-35  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_009077  Mjls_0469  short-chain dehydrogenase/reductase SDR  40.82 
 
 
258 aa  150  3e-35  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0480  short-chain dehydrogenase/reductase SDR  40.46 
 
 
258 aa  149  7e-35  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0491  short-chain dehydrogenase/reductase SDR  40.46 
 
 
258 aa  149  7e-35  Mycobacterium sp. KMS  Bacteria  normal  normal  0.354983 
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  42.15 
 
 
255 aa  147  2.0000000000000003e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  41.44 
 
 
250 aa  142  6e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_013131  Caci_8408  short-chain dehydrogenase/reductase SDR  41.6 
 
 
254 aa  140  3e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.485174  normal 
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  40.43 
 
 
267 aa  137  1e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_013172  Bfae_25790  short-chain dehydrogenase of unknown substrate specificity  36.5 
 
 
282 aa  137  2e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  41.67 
 
 
266 aa  137  3.0000000000000003e-31  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  41.67 
 
 
266 aa  136  3.0000000000000003e-31  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  42.42 
 
 
261 aa  136  4e-31  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  42.67 
 
 
266 aa  135  8e-31  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_009664  Krad_1004  short-chain dehydrogenase/reductase SDR  38.15 
 
 
276 aa  135  9e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.118299  decreased coverage  0.00158374 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  38.4 
 
 
263 aa  134  9.999999999999999e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  41.78 
 
 
266 aa  134  9.999999999999999e-31  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_009338  Mflv_0244  short-chain dehydrogenase/reductase SDR  38.78 
 
 
258 aa  134  1.9999999999999998e-30  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  35.71 
 
 
271 aa  133  3e-30  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  41.33 
 
 
281 aa  133  3.9999999999999996e-30  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  41.33 
 
 
281 aa  133  3.9999999999999996e-30  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  39.66 
 
 
266 aa  132  5e-30  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_012792  Vapar_5551  short-chain dehydrogenase/reductase SDR  37.82 
 
 
266 aa  132  5e-30  Variovorax paradoxus S110  Bacteria  normal  0.614615  n/a   
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  40 
 
 
283 aa  132  6e-30  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_2349  short-chain dehydrogenase/reductase SDR  36.4 
 
 
266 aa  132  6e-30  Polaromonas sp. JS666  Bacteria  normal  0.341044  normal 
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  38.4 
 
 
264 aa  131  1.0000000000000001e-29  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_008726  Mvan_0661  short-chain dehydrogenase/reductase SDR  38.4 
 
 
258 aa  130  2.0000000000000002e-29  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.381329 
 
 
-
 
NC_008541  Arth_0289  short-chain dehydrogenase/reductase SDR  37.26 
 
 
258 aa  130  3e-29  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  41.15 
 
 
271 aa  129  4.0000000000000003e-29  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  41.43 
 
 
257 aa  129  5.0000000000000004e-29  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  40.91 
 
 
260 aa  129  8.000000000000001e-29  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  39.05 
 
 
260 aa  128  9.000000000000001e-29  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  40 
 
 
266 aa  128  9.000000000000001e-29  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_013730  Slin_4202  short-chain dehydrogenase/reductase SDR  32.21 
 
 
344 aa  127  2.0000000000000002e-28  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0308  short-chain dehydrogenase/reductase SDR  35.65 
 
 
266 aa  127  2.0000000000000002e-28  Rhodoferax ferrireducens T118  Bacteria  normal  0.130238  n/a   
 
 
-
 
NC_013441  Gbro_2014  short-chain dehydrogenase/reductase SDR  36.88 
 
 
268 aa  127  2.0000000000000002e-28  Gordonia bronchialis DSM 43247  Bacteria  normal  0.700313  n/a   
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  35.2 
 
 
249 aa  127  2.0000000000000002e-28  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  39.73 
 
 
264 aa  127  2.0000000000000002e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_010505  Mrad2831_4718  short-chain dehydrogenase/reductase SDR  41.62 
 
 
270 aa  126  3e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0516  short-chain dehydrogenase/reductase SDR  37.7 
 
 
263 aa  126  4.0000000000000003e-28  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009953  Sare_4948  short-chain dehydrogenase/reductase SDR  35.71 
 
 
253 aa  126  5e-28  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.623441 
 
 
-
 
NC_012669  Bcav_3647  short-chain dehydrogenase/reductase SDR  38.28 
 
 
255 aa  125  9e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007514  Cag_0350  short chain dehydrogenase/reductase family oxidoreductase  38.65 
 
 
259 aa  125  1e-27  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.000771311  n/a   
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  41.08 
 
 
264 aa  124  1e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  30.11 
 
 
265 aa  124  1e-27  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  33.85 
 
 
264 aa  124  1e-27  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_013521  Sked_35320  short-chain dehydrogenase of unknown substrate specificity  38.55 
 
 
249 aa  124  2e-27  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.135035  normal  0.316469 
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  36.33 
 
 
265 aa  124  2e-27  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_008705  Mkms_3711  short-chain dehydrogenase/reductase SDR  35.02 
 
 
268 aa  124  2e-27  Mycobacterium sp. KMS  Bacteria  normal  0.428554  normal 
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  36.53 
 
 
259 aa  123  3e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  29.74 
 
 
265 aa  123  3e-27  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_009077  Mjls_3643  short-chain dehydrogenase/reductase SDR  35.02 
 
 
268 aa  123  3e-27  Mycobacterium sp. JLS  Bacteria  normal  0.129425  normal 
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  35.34 
 
 
273 aa  123  3e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_6420  short-chain dehydrogenase/reductase SDR  38.49 
 
 
259 aa  122  5e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  36.78 
 
 
265 aa  122  5e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  36.89 
 
 
264 aa  122  6e-27  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_012850  Rleg_0887  short-chain dehydrogenase/reductase SDR  35.65 
 
 
266 aa  122  8e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4315  short-chain dehydrogenase/reductase SDR  35.32 
 
 
267 aa  122  9e-27  Mycobacterium sp. JLS  Bacteria  normal  normal  0.294207 
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  40.91 
 
 
265 aa  121  9.999999999999999e-27  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  36.74 
 
 
262 aa  121  9.999999999999999e-27  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_4085  short-chain dehydrogenase/reductase SDR  34.94 
 
 
267 aa  121  9.999999999999999e-27  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  39.05 
 
 
262 aa  121  9.999999999999999e-27  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_4770  short-chain dehydrogenase/reductase SDR  34.38 
 
 
266 aa  121  9.999999999999999e-27  Caulobacter sp. K31  Bacteria  normal  normal  0.228735 
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  36.74 
 
 
262 aa  121  9.999999999999999e-27  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_4161  short-chain dehydrogenase/reductase SDR  34.94 
 
 
267 aa  121  9.999999999999999e-27  Mycobacterium sp. KMS  Bacteria  normal  0.209625  normal 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  38.26 
 
 
271 aa  120  1.9999999999999998e-26  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  40.2 
 
 
265 aa  120  1.9999999999999998e-26  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_008146  Mmcs_3638  short-chain dehydrogenase/reductase SDR  34.51 
 
 
255 aa  121  1.9999999999999998e-26  Mycobacterium sp. MCS  Bacteria  normal  0.125829  n/a   
 
 
-
 
NC_008726  Mvan_3324  short-chain dehydrogenase/reductase SDR  36.53 
 
 
269 aa  120  1.9999999999999998e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.377978 
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  35.07 
 
 
258 aa  120  1.9999999999999998e-26  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  40 
 
 
262 aa  120  3e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  37.45 
 
 
264 aa  119  4.9999999999999996e-26  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  36.67 
 
 
263 aa  119  4.9999999999999996e-26  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  39.09 
 
 
269 aa  119  4.9999999999999996e-26  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_011879  Achl_3992  short-chain dehydrogenase/reductase SDR  38.43 
 
 
251 aa  119  6e-26  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.608737 
 
 
-
 
NC_009565  TBFG_12531  short-chain type dehydrogenase/reductase  35.02 
 
 
268 aa  119  6e-26  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00342881 
 
 
-
 
NC_014151  Cfla_2979  short-chain dehydrogenase/reductase SDR  37.21 
 
 
269 aa  119  7e-26  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  36.74 
 
 
262 aa  119  7e-26  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  39.9 
 
 
262 aa  118  7.999999999999999e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_1655  short-chain dehydrogenase/reductase SDR  35.8 
 
 
272 aa  119  7.999999999999999e-26  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2681  short chain dehydrogenase  35.89 
 
 
263 aa  118  9e-26  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A2639  short chain dehydrogenase  35.89 
 
 
263 aa  118  9e-26  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C2705  short chain dehydrogenase  35.89 
 
 
263 aa  118  9e-26  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.856225  normal 
 
 
-
 
NC_011205  SeD_A2811  short chain dehydrogenase  35.89 
 
 
263 aa  118  9e-26  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B2590  short chain dehydrogenase  35.89 
 
 
263 aa  118  9e-26  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  41.29 
 
 
266 aa  118  9.999999999999999e-26  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1841  short chain dehydrogenase/reductase family oxidoreductase  38.31 
 
 
250 aa  118  9.999999999999999e-26  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00165114  n/a   
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  31.2 
 
 
264 aa  117  9.999999999999999e-26  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_007958  RPD_0689  short-chain dehydrogenase/reductase SDR  36.92 
 
 
259 aa  118  9.999999999999999e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
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