More than 300 homologs were found in PanDaTox collection
for query gene PA14_20780 on replicon NC_008463
Organism: Pseudomonas aeruginosa UCBPP-PA14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_4363  response regulator receiver protein  62.08 
 
 
563 aa  698    Pseudomonas putida KT2440  Bacteria  normal  normal  0.470941 
 
 
-
 
NC_008463  PA14_20780  putative two-component response regulator  100 
 
 
571 aa  1156    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.283191  normal 
 
 
-
 
NC_004578  PSPTO_1964  response regulator  64.29 
 
 
568 aa  729    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.58831  n/a   
 
 
-
 
NC_010501  PputW619_3688  response regulator receiver protein  63.21 
 
 
564 aa  702    Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3451  response regulator receiver:ATP-binding region, ATPase-like:stage II sporulation E  65.71 
 
 
568 aa  740    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.223622  normal 
 
 
-
 
NC_009512  Pput_1504  response regulator receiver protein  62.08 
 
 
563 aa  697    Pseudomonas putida F1  Bacteria  normal  0.709749  normal  0.106415 
 
 
-
 
NC_009656  PSPA7_1784  putative two-component response regulator  96.67 
 
 
571 aa  1117    Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1542  response regulator receiver domain-containing protein  68.34 
 
 
567 aa  756    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.3365  normal  0.98827 
 
 
-
 
NC_009439  Pmen_2819  response regulator receiver protein  75.84 
 
 
562 aa  822    Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0360472 
 
 
-
 
NC_012560  Avin_34360  Response regulator  73.84 
 
 
575 aa  815    Azotobacter vinelandii DJ  Bacteria  normal  0.328347  n/a   
 
 
-
 
NC_010322  PputGB1_3924  response regulator receiver protein  62.97 
 
 
563 aa  704    Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_2179  flagellar basal-body rod protein FlgC  48.86 
 
 
575 aa  536  1e-151  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_1991  response regulator receiver protein  48.16 
 
 
574 aa  532  1e-150  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3440  response regulator receiver protein  42.02 
 
 
572 aa  444  1e-123  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3580  response regulator receiver protein  39.61 
 
 
564 aa  436  1e-121  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_2157  response regulator receiver protein  37.12 
 
 
577 aa  353  5e-96  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3118  response regulator receiver domain-containing protein  35.64 
 
 
563 aa  350  5e-95  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_1594  response regulator receiver protein  33.93 
 
 
548 aa  316  8e-85  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01717  putative response regulator  33.04 
 
 
568 aa  312  1e-83  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0157  response regulator  30.5 
 
 
568 aa  284  3.0000000000000004e-75  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_2342  response regulator receiver protein  32.18 
 
 
561 aa  266  5.999999999999999e-70  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00850448  normal 
 
 
-
 
NC_007520  Tcr_1039  response regulator receiver domain-containing protein  29.16 
 
 
567 aa  260  4e-68  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_2956  response regulator receiver protein  37.33 
 
 
365 aa  254  3e-66  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3534  response regulator receiver protein  32.3 
 
 
393 aa  216  9.999999999999999e-55  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2095  response regulator receiver protein  26 
 
 
567 aa  197  5.000000000000001e-49  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1879  response regulator receiver protein  26 
 
 
567 aa  197  5.000000000000001e-49  Shewanella sp. MR-7  Bacteria  normal  normal  0.686257 
 
 
-
 
NC_008576  Mmc1_3071  response regulator receiver protein  33.33 
 
 
390 aa  196  9e-49  Magnetococcus sp. MC-1  Bacteria  normal  hitchhiker  0.000442652 
 
 
-
 
NC_008577  Shewana3_2220  response regulator receiver protein  25.57 
 
 
565 aa  193  8e-48  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3023  response regulator receiver protein  33.42 
 
 
367 aa  186  8e-46  Magnetococcus sp. MC-1  Bacteria  normal  0.566048  normal 
 
 
-
 
NC_008576  Mmc1_2528  response regulator receiver protein  33.83 
 
 
378 aa  183  9.000000000000001e-45  Magnetococcus sp. MC-1  Bacteria  normal  0.249668  normal  0.0734484 
 
 
-
 
NC_004347  SO_2119  response regulator  26.5 
 
 
565 aa  181  2.9999999999999997e-44  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_2226  response regulator receiver protein  28.16 
 
 
383 aa  181  4e-44  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.916787 
 
 
-
 
NC_009997  Sbal195_2366  response regulator receiver protein  26.3 
 
 
577 aa  179  8e-44  Shewanella baltica OS195  Bacteria  normal  0.018295  normal 
 
 
-
 
NC_009665  Shew185_2249  response regulator receiver protein  26.47 
 
 
577 aa  179  1e-43  Shewanella baltica OS185  Bacteria  normal  0.299733  n/a   
 
 
-
 
NC_011663  Sbal223_2096  response regulator receiver protein  26.51 
 
 
577 aa  177  5e-43  Shewanella baltica OS223  Bacteria  normal  0.856197  normal 
 
 
-
 
NC_009654  Mmwyl1_3297  response regulator receiver protein  25.18 
 
 
550 aa  173  5.999999999999999e-42  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_0435  response regulator receiver protein  31.54 
 
 
373 aa  171  3e-41  Magnetococcus sp. MC-1  Bacteria  normal  0.0149866  normal 
 
 
-
 
NC_009052  Sbal_2110  stage II sporulation E family protein  30.16 
 
 
369 aa  143  7e-33  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_1726  putative PAS/PAC sensor protein  32.43 
 
 
504 aa  138  3.0000000000000003e-31  Magnetococcus sp. MC-1  Bacteria  normal  0.0909206  normal  0.287685 
 
 
-
 
NC_011831  Cagg_2467  response regulator receiver modulated serine phosphatase  28.94 
 
 
385 aa  135  1.9999999999999998e-30  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0106  stage II sporulation E  31.91 
 
 
415 aa  133  1.0000000000000001e-29  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0347  PAS  33.62 
 
 
513 aa  131  4.0000000000000003e-29  Dechloromonas aromatica RCB  Bacteria  normal  unclonable  0.000000072068 
 
 
-
 
NC_009952  Dshi_3485  response regulator  27.43 
 
 
422 aa  124  4e-27  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2998  response regulator receiver protein  26.84 
 
 
377 aa  122  1.9999999999999998e-26  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_3648  response regulator receiver modulated serine phosphatase  27.09 
 
 
380 aa  120  7e-26  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008009  Acid345_2946  response regulator receiver modulated serine phosphatase  25.35 
 
 
384 aa  118  3e-25  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_2870  response regulator receiver protein  30.25 
 
 
418 aa  117  7.999999999999999e-25  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_2943  response regulator receiver modulated serine phosphatase  26.13 
 
 
470 aa  114  6e-24  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_1210  response regulator receiver protein  30.03 
 
 
400 aa  113  7.000000000000001e-24  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.0544929  n/a   
 
 
-
 
NC_008044  TM1040_2887  response regulator receiver modulated serine phosphatase  25.92 
 
 
423 aa  112  2.0000000000000002e-23  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_0589  response regulator receiver modulated serine phosphatase  28.45 
 
 
371 aa  110  6e-23  Rhodothermus marinus DSM 4252  Bacteria  normal  0.420228  n/a   
 
 
-
 
NC_008347  Mmar10_0279  response regulator receiver modulated serine phosphatase  28.45 
 
 
394 aa  109  1e-22  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_05729  putative diguanylate cyclase  39.73 
 
 
323 aa  108  2e-22  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007413  Ava_3723  response regulator receiver (CheY) modulated Serine phosphatase  25.46 
 
 
378 aa  108  2e-22  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0976167  normal  0.601311 
 
 
-
 
NC_007802  Jann_0071  response regulator receiver (CheY-like) modulated serine phosphatase  25.67 
 
 
426 aa  109  2e-22  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_2383  response regulator receiver modulated diguanylate cyclase  41.45 
 
 
434 aa  107  8e-22  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.00665942 
 
 
-
 
NC_007413  Ava_1777  metal dependent phosphohydrolase, HD region with response regulator receiver modulation  39.5 
 
 
414 aa  106  1e-21  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1440  response regulator  26.61 
 
 
391 aa  104  4e-21  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0677305  n/a   
 
 
-
 
NC_007912  Sde_3005  response regulator receiver modulated diguanylate cyclase  36.76 
 
 
303 aa  104  4e-21  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.000288968 
 
 
-
 
NC_008312  Tery_0921  response regulator receiver modulated serine phosphatase  26.84 
 
 
378 aa  104  4e-21  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_0045  adenylate/guanylate cyclase  40.27 
 
 
382 aa  103  6e-21  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013526  Tter_2192  response regulator receiver modulated diguanylate cyclase  41.67 
 
 
303 aa  103  9e-21  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_0495  response regulator receiver protein  26.76 
 
 
423 aa  102  1e-20  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_05599  response regulator receiver  22.28 
 
 
560 aa  102  2e-20  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008347  Mmar10_1277  response regulator receiver modulated diguanylate cyclase  41.32 
 
 
454 aa  102  2e-20  Maricaulis maris MCS10  Bacteria  normal  0.410696  normal  0.0388481 
 
 
-
 
NC_013457  VEA_000121  response regulator  38.36 
 
 
319 aa  102  2e-20  Vibrio sp. Ex25  Bacteria  normal  0.0601608  n/a   
 
 
-
 
NC_014248  Aazo_0176  response regulator receiver modulated serine phosphatase  25.71 
 
 
378 aa  102  2e-20  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1088  response regulator  26.56 
 
 
380 aa  101  3e-20  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3604  putative PAS/PAC sensor protein  34.07 
 
 
619 aa  101  3e-20  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.562878 
 
 
-
 
NC_011312  VSAL_I2575  chitin degradation sensor protein  37.32 
 
 
1127 aa  101  3e-20  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1161  response regulator  26.74 
 
 
380 aa  100  6e-20  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1035  response regulator  25.91 
 
 
380 aa  100  7e-20  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0898  sigma factor sigB regulation protein  26.3 
 
 
380 aa  100  7e-20  Bacillus cereus E33L  Bacteria  normal  0.503671  n/a   
 
 
-
 
NC_005945  BAS0930  response regulator  25.77 
 
 
380 aa  100  9e-20  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0915  sigma factor sigB regulation protein  26.3 
 
 
380 aa  100  9e-20  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00116334  n/a   
 
 
-
 
NC_007530  GBAA_0994  response regulator  25.77 
 
 
380 aa  100  9e-20  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0793  two component transcriptional regulator, winged helix family  43.22 
 
 
225 aa  99.4  1e-19  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_1702  response regulator receiver modulated serine phosphatase  25.51 
 
 
460 aa  99.8  1e-19  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1665  response regulator receiver modulated diguanylate cyclase  43.07 
 
 
313 aa  99.8  1e-19  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B4268  response regulator  25.91 
 
 
380 aa  99.8  1e-19  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00568873 
 
 
-
 
NC_009428  Rsph17025_2647  response regulator receiver protein  27.36 
 
 
418 aa  99.4  1e-19  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0228439  normal  0.825958 
 
 
-
 
NC_010184  BcerKBAB4_0905  response regulator receiver modulated serine phosphatase  25.83 
 
 
380 aa  98.6  2e-19  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1070  response regulator  26.74 
 
 
358 aa  99.4  2e-19  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  9.209800000000002e-41 
 
 
-
 
NC_009901  Spea_1432  response regulator receiver modulated serine phosphatase  25.06 
 
 
407 aa  99.4  2e-19  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1566  response regulator receiver (CheY) modulated Serine phosphatase  22.91 
 
 
396 aa  98.2  3e-19  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.244929 
 
 
-
 
NC_008577  Shewana3_2013  response regulator receiver modulated serine phosphatase  25.83 
 
 
411 aa  98.2  4e-19  Shewanella sp. ANA-3  Bacteria  normal  0.155477  normal  0.0155604 
 
 
-
 
NC_009901  Spea_0302  response regulator receiver modulated serine phosphatase  24.55 
 
 
400 aa  97.4  7e-19  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1474  response regulator receiver modulated metal dependent phosphohydrolase  28.4 
 
 
345 aa  97.1  8e-19  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0702  response regulator receiver modulated metal dependent phosphohydrolase  41.35 
 
 
331 aa  97.1  9e-19  Roseiflexus sp. RS-1  Bacteria  normal  0.140022  normal 
 
 
-
 
NC_011004  Rpal_3541  response regulator PleD  38.71 
 
 
457 aa  96.3  1e-18  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0208  response regulator receiver domain-containing protein  20.14 
 
 
564 aa  96.3  1e-18  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1558  response regulator receiver protein  26.18 
 
 
566 aa  96.7  1e-18  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2152  putative response regulator, putative serine phosphatase  25.43 
 
 
434 aa  95.9  2e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_000007  serine phosphatase RsbU regulator of sigma subunit  24.38 
 
 
397 aa  95.9  2e-18  Vibrio sp. Ex25  Bacteria  normal  0.441967  n/a   
 
 
-
 
NC_007796  Mhun_1941  response regulator receiver domain-containing protein  35.83 
 
 
156 aa  95.9  2e-18  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007955  Mbur_0878  response regulator receiver  36.23 
 
 
302 aa  95.9  2e-18  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_0749  response regulator receiver protein  40.65 
 
 
406 aa  95.9  2e-18  Cyanothece sp. PCC 7425  Bacteria  normal  0.893418  normal  0.0890519 
 
 
-
 
NC_009976  P9211_17451  two-component response regulator  41.48 
 
 
269 aa  95.1  3e-18  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_002587  chitin catabolic cascade sensor histidine kinase ChiS  38.6 
 
 
1111 aa  95.1  3e-18  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3321  two component transcriptional regulator, LuxR family  41.67 
 
 
305 aa  94.7  4e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.536368 
 
 
-
 
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