Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1594 |
Symbol | |
ID | 4173848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1898961 |
End bp | 1900607 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638054604 |
Product | response regulator receiver protein |
Protein accession | YP_661170 |
Protein GI | 109897915 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATAC TTATCGTCGA TGATGACTCC CTTAATCGAT TTTTACTTTT GCATATGCTC GAACAAAAGG GTTATGTAGA TTGTTACGAG GCTGAAAGTG GCCACGAGGC AGTGTCATTG GCTAAGCGGA TCAACCCAGA ATTGGTCTTA CTCGATGTCA TGATGGACGA CATGAATGGG TATGAAGTCG CACCGATACT CAAAGAGCAA GCCGGTGATA TCTATTTACC CATTATCTTC ATCACGGCAC TGGATGATGA AGAAAGCTTA GTGCGCTGCT TAGAGGTAGG CGGTGATGAC TTCGTCGCCA AGCCATTTAA TAAAACCATT TTAGCGGCCA AAATCAGTGC CCATGCACGC ACACGCGAAT TAAGCAAAAA GTCCTACGAG CAAAATCAAC AACTGGTTTT TTACCGCAGT GCGGTGGAGC GAGAGCACAA AATTGTTGAG CACATCTTTT CGAATGCAGT GACTAACGAC AAAAAATTGT TGCCGTATAT AGATTTTACG CTCATGCCAG CGACAGATTT TAATGGCGAT TTATTGTTGT TTAGCGCGAG CCCTAATGGC GGGCTGTATT ACTTGATCGG GGATTTTACT GGTCATGGCT TGGCCGCGGC GATCGGTGCG TTGCCCGTCT CTCAAGCCTT TCATACTATG GCGAGTAAAG GATTGTCAGT GTTTGAAATG GCTCAAACCT TAAACGAAAC CTTACTCAAA CTATTACCTG GAGATATGTT TTTTGCCGCA GCAATTGTGC ATATTAGCAG CACTGGTACG CGCTTTGAGA TATGGAACAG TGGGATGCCG GATCTTCTAC TTTTTGATTT GAATGGGCAA GTCATTAAGC GCTTTGGGTC TCAGCACATG GCTTTGGGCA TATTAGAACC CCACGAAATG GGTAAGGATG TTCAGCGGCA TCAAAGCTCA GTGGGTGAAC GTTTACTGGC GTTTTCAGAT GGTGTAATTG AGATCACGGA CGACGAGAAA AATATGCTAG GTGAAGCGCC TATTACGGAC TGGATTGCCC AAAAAGCGGA TATGTCAGTT TTTGAATTAT TTGAACACAT TACACATTTT AGCCAAGATA CAGACCCCCT AGACGATCTC ACCTGCGTAT CTTATACCTG TCAGTCTCTG TCTGCGCTCG CACGGCGTCA GCAGGTTACA CATGTACCCT TTAAATTAAA CCTTACTCTT GATGCTGAAA CGATAATTGA AACTGATCCC GTGAAAAGTG TAATCAATAT GGTTTGTAGC CAAATAGGTA TGTATGGTTT ACATGCTCGC TTATTTACCC TGGTAAGTGA ATTATACAAT AACGCACTGG ACCACGGAGT ATTGCAGTTA GATTCAAATC TAAAGCACTC CCCCGAAGGT TTTGAAGCAT ATTTTGACTT GCGTATGCAG AGGTTGGCGC AATTGAACCA GGCGCAGATT ACGATTACGT TAACGTACGA GCCTGCACAG AGACGCTTGA TTATCGTGGT ACGCGACTCC GGTTCTGGTT TTGATTACCA GCAATATTCT AAGCAAGTGG ATGTAGAGAA TTGCTTTGGG CGAGGCATCC AGCTAGTCAA TGAGTTGTCG GATTCAGTAC GATATTTTGA ATCTGGCAAT GCAGTTGAAG TGACAATTAA CGTATGA
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Protein sequence | MRILIVDDDS LNRFLLLHML EQKGYVDCYE AESGHEAVSL AKRINPELVL LDVMMDDMNG YEVAPILKEQ AGDIYLPIIF ITALDDEESL VRCLEVGGDD FVAKPFNKTI LAAKISAHAR TRELSKKSYE QNQQLVFYRS AVEREHKIVE HIFSNAVTND KKLLPYIDFT LMPATDFNGD LLLFSASPNG GLYYLIGDFT GHGLAAAIGA LPVSQAFHTM ASKGLSVFEM AQTLNETLLK LLPGDMFFAA AIVHISSTGT RFEIWNSGMP DLLLFDLNGQ VIKRFGSQHM ALGILEPHEM GKDVQRHQSS VGERLLAFSD GVIEITDDEK NMLGEAPITD WIAQKADMSV FELFEHITHF SQDTDPLDDL TCVSYTCQSL SALARRQQVT HVPFKLNLTL DAETIIETDP VKSVINMVCS QIGMYGLHAR LFTLVSELYN NALDHGVLQL DSNLKHSPEG FEAYFDLRMQ RLAQLNQAQI TITLTYEPAQ RRLIIVVRDS GSGFDYQQYS KQVDVENCFG RGIQLVNELS DSVRYFESGN AVEVTINV
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