Gene Pden_0495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0495 
Symbol 
ID4581037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp467633 
End bp468904 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content68% 
IMG OID639767812 
Productresponse regulator receiver protein 
Protein accessionYP_914303 
Protein GI119383247 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATCA TCGATGCACA GGCCCTAAGC TCCGTACCGC ATGGCTGGCG GCTGGTCCTG 
CTTGTCGACG ACAGCCGGGC GCAAAGGCGG ACGCTGGCGG TGCAACTGAT CCGTGCCGGC
TATCATGTGG TCGAGGCGGC AAGCGGCGAC GAGGCGATGC GCATCTGCCT GGAACGGCGG
CCGGACATCG TGATCTCGGA CTGGATGATG CCGGGGCAAA GCGGGCTGGA ATTCTGCCGC
CGCTTCCGCG AGATGCAGTC GGATCGCTAT GGCTATTTCA TCCTGCTGAC CTCGCGCAAC
GACAAGAAGG ACATTGCCGA AGGGTTGCGG GCCGGCGCCG ACGAATTCCT GACCAAGCCG
GTCTCGGGGG CCGAACTGCT GGCGCGGCTT TCGGCCAGCG AGCGCATCCT GCGCATGGAG
GAAAGCCTGC GCAGCGCCAA CGCCCGGCTC AACTCCACGC TGACCCGGCT GCGCGAGACC
CAGGCGGCGA TCGACCGCGA CCTGCGCGAA GCGCAGCGGC TGCAACAGGG GCTGGTGCGG
GAACGCCATG GCCGCTACGG CGATTTCGAC CTGTCCCTCC TGATGCGCCC GGCCGGCCAT
ATCGGCGGCG ACCTGGTCGG ATTCTTCCCG ATCAACGCCC GCCGCGTCGG GTTGTTCGCG
CTGGACGTGG CCGGGCATGG CGTCGCCTCG GCCCTGCTTT GCGCACGGCT CGCGGCGCTG
CTTTCCGGGG CAGCGGACCA GAACATCGCG CTGCGGATCA CCGAGCTGGG TCTTTGCGAC
GCCCGCCCCC CGGCCGAGAT CCTGCACCAC CTGAACACGC TGATGATCGA GGAATTGCGC
ACCGAATCCT ATTTCACCAT GGTCTATGCC GACCTGGATT TCCTGACCGG AGCGCTGCGG
CTGGTGCAGG CGGGCCACCC CCACCCCGTG CTGCAACGCG CCGACGGCCG CATCGAGAGC
ATCGGACGCG GCGGCCTGCC CGTGGGCGTC TTTTCCCATG CCGCCTACGA AGAGGTGCAG
CTGGTGCTCG ATCCCGGCGA CCGGCTGTTC ATCAGTTCGG ACGGGCTGTC CGAAAGCGAG
AATGCCCGCG GCGAGCCGCT GGGCGAGGAC GGGCTGCATG CCATCCTGCG CACCAATGCC
ACGCTGCGGG GCGACTCGCT GCTGGAATCG ATCTGCTGGT CCGCGGCACA TTACGCCGGT
GGCCAGCGCA ACGACGACAT CTCGGCCGTG CTGATCGAGC GGCGGCAGGA AGCCGGCCAG
ACATGGGGTT GA
 
Protein sequence
MMIIDAQALS SVPHGWRLVL LVDDSRAQRR TLAVQLIRAG YHVVEAASGD EAMRICLERR 
PDIVISDWMM PGQSGLEFCR RFREMQSDRY GYFILLTSRN DKKDIAEGLR AGADEFLTKP
VSGAELLARL SASERILRME ESLRSANARL NSTLTRLRET QAAIDRDLRE AQRLQQGLVR
ERHGRYGDFD LSLLMRPAGH IGGDLVGFFP INARRVGLFA LDVAGHGVAS ALLCARLAAL
LSGAADQNIA LRITELGLCD ARPPAEILHH LNTLMIEELR TESYFTMVYA DLDFLTGALR
LVQAGHPHPV LQRADGRIES IGRGGLPVGV FSHAAYEEVQ LVLDPGDRLF ISSDGLSESE
NARGEPLGED GLHAILRTNA TLRGDSLLES ICWSAAHYAG GQRNDDISAV LIERRQEAGQ
TWG