| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2819 |
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| Symbol | |
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| ID | 5107615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3095803 |
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| End bp | 3097491 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504069 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001188306 |
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| Protein GI | 146307841 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0360472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAGC GCCTGTCGAT CCTGATCGTC GAGGACAACG CGGCCGACCG CATGCTGCTG
TCGACTATCG TCAGTCGGCA GGGGCACAGG GTACTCACCG CCGGCAATGG GCTGGAGGCG
GTCGCCCTGT TCGAGCAGGA GCGGCCGCAC CTGGTGCTGA TGGATGCCCT GATGCCGGTA
ATGGACGGTT TCGAGGCCGC CCGCCGTATC AAGCAGCAGG CCGGCGAAGC GCTGGTGCCG
ATCATCTTTC TCACCTCGCT CACCGAGAAC GAGGCGCTGG TGCGTTGCCT GGAGGCGGGC
GGCGACGATT TTCTCGCCAA GCCCTACAAC CGGGTGATAC TCGAAGCCAA GATCGGCGCC
ATGGATCGCC TGCGCCGCTT GCAGGCCACC GTGCTGGAAC AGCGTGACCT GATCGCCCGG
CACAACGAAC ACCTGCTGCG CGAGCAGCGA GTGGCCAAAG CGGTATTCGA CAAGGTGGCG
CACTCCGGCT GCCTCGACGC CCCCAATATC CGTTATCTGC AATCGCCCTA TGCGCTGTTC
AATGGCGACC TGCTGCTGGC GGCGTACACG CCCTCCGGCG GCATGCACGT GATGCTGGGC
GACTTCACCG GGCACGGCTT GCCGGCCGCC ATTGGCGCCA TGCCGCTGGC CGAGGTGTTC
TACGGCATGA CCTCCAAAGG CCATGCCCTG GCCGAGATCC TTCGCGAGAT CAATGCCAAG
CTCAAGCGCA TCCTGCCGGT TGGGGTGTTC TGCTGCGCCA CCCTGCTCAA CATCAGCAGC
CAGCGGGGCC TGCTCGAGGT GTGGAACGGC GGGCTGCCCG ATGGCTATCT GCTGCATGGC
GACGGGCGAC CGCGTCAGGC GCTGGTGTCA CGTCATCTGC CGTTGGGCAT TCTCGAGCCG
GCGGCATTCA GCGATCGCTG CGAGGTATAT CCCCTGGCCG AGGGGGATCG CATATTCCTG
CTCAGCGACG GCGTGCTGGA GGCCTGCAAC CAGCAGGGCC AGCTGTTCGG CGAAGAGCGT
CTACTGGCCC TGCTCGATGC CAATCGCCAG CCGCAGGCGC TGTTCGAGGA AATCCAGCGG
GCCTTGGTGG AGTTCCGCGG CGAAGTGCAG GACGACGTCA GCATGCTGCA GGTCGGCCTT
GCCGAAGACG ACGAGCGCCC CCGGCCCCTG GCCTTTGCCG ACAGCGGCCA GAGCAGTTCG
CTGGACTGGT CGGCCAGTTT CGAGTTTCGC GCGCAGAGCC TGCGCCATTT TAATCCCTTG
CCCTACCTGT TGCAGCTGCT GCTGGACGTG CAGGCCCTGC GACCGCGGGG CGGGGAGCTG
TACACCGTCC TGGCCGAGCT CTACTCCAAT GCCCTGGAGC ACGGCGTGAT GGGGCTGAAC
TCCGCGCTCA AGCAGGATGC CAGCGGTTTT GCCGAGTACT ACCGTGAGCG CCGCCTGCGC
CTGGCCGCGC TGCACGAGGG GTACGTGCGC TTCCACCTGC GGATGCTGCC GGAGGACGGG
GGTGGCCGTC TGATCGTGCG GGTCGAGGAC AGCGGTCCCG GCTTCGATCC GGGCAGGGTC
ATGGCGGCTG GCGACGAAGC CCTGTGCGGA CGCGGGCTGG CCCTGGTGCG TCAGCTCAGT
GATGGCTTCC ATGTCGCGCC GGGTGGCCAG GGGGTCAGCG TGGAGTTTTG CTGGTCCTCT
GAGGCATAA
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| Protein sequence | MPERLSILIV EDNAADRMLL STIVSRQGHR VLTAGNGLEA VALFEQERPH LVLMDALMPV
MDGFEAARRI KQQAGEALVP IIFLTSLTEN EALVRCLEAG GDDFLAKPYN RVILEAKIGA
MDRLRRLQAT VLEQRDLIAR HNEHLLREQR VAKAVFDKVA HSGCLDAPNI RYLQSPYALF
NGDLLLAAYT PSGGMHVMLG DFTGHGLPAA IGAMPLAEVF YGMTSKGHAL AEILREINAK
LKRILPVGVF CCATLLNISS QRGLLEVWNG GLPDGYLLHG DGRPRQALVS RHLPLGILEP
AAFSDRCEVY PLAEGDRIFL LSDGVLEACN QQGQLFGEER LLALLDANRQ PQALFEEIQR
ALVEFRGEVQ DDVSMLQVGL AEDDERPRPL AFADSGQSSS LDWSASFEFR AQSLRHFNPL
PYLLQLLLDV QALRPRGGEL YTVLAELYSN ALEHGVMGLN SALKQDASGF AEYYRERRLR
LAALHEGYVR FHLRMLPEDG GGRLIVRVED SGPGFDPGRV MAAGDEALCG RGLALVRQLS
DGFHVAPGGQ GVSVEFCWSS EA
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