More than 300 homologs were found in PanDaTox collection
for query gene Cyan7425_0749 on replicon NC_011884
Organism: Cyanothece sp. PCC 7425



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011884  Cyan7425_0749  response regulator receiver protein  100 
 
 
406 aa  817    Cyanothece sp. PCC 7425  Bacteria  normal  0.893418  normal  0.0890519 
 
 
-
 
NC_007604  Synpcc7942_1815  response regulator receiver domain-containing protein  45.23 
 
 
411 aa  309  6.999999999999999e-83  Synechococcus elongatus PCC 7942  Bacteria  normal  0.800608  normal  0.49797 
 
 
-
 
NC_009620  Smed_3762  putative adenylate/guanylate cyclase  40.85 
 
 
520 aa  187  3e-46  Sinorhizobium medicae WSM419  Bacteria  normal  0.978534  normal 
 
 
-
 
NC_008312  Tery_3999  adenylate/guanylate cyclase  62.22 
 
 
351 aa  186  9e-46  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.558191 
 
 
-
 
NC_010511  M446_2803  adenylate/guanylate cyclase  37.58 
 
 
531 aa  162  9e-39  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2467  response regulator receiver modulated serine phosphatase  47.53 
 
 
385 aa  161  2e-38  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_0605  adenylate/guanylate cyclase  54.81 
 
 
355 aa  153  5.9999999999999996e-36  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.657653  n/a   
 
 
-
 
NC_009767  Rcas_3136  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  52.67 
 
 
919 aa  142  9.999999999999999e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3309  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  50.38 
 
 
900 aa  137  2e-31  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.269875  normal  0.342346 
 
 
-
 
NC_010511  M446_1528  adenylate/guanylate cyclase  54.14 
 
 
350 aa  138  2e-31  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_013422  Hneap_0133  response regulator receiver modulated diguanylate cyclase  29.06 
 
 
461 aa  134  3e-30  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2343  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  45.14 
 
 
921 aa  134  3.9999999999999996e-30  Roseiflexus sp. RS-1  Bacteria  normal  0.762005  normal 
 
 
-
 
NC_010505  Mrad2831_0215  adenylate/guanylate cyclase  51.13 
 
 
351 aa  129  9.000000000000001e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.354021  normal 
 
 
-
 
NC_002978  WD0221  response regulator PleD  43.08 
 
 
460 aa  112  1.0000000000000001e-23  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1237  two component transcriptional regulator, winged helix family  36.02 
 
 
234 aa  109  7.000000000000001e-23  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.178035  n/a   
 
 
-
 
NC_008576  Mmc1_3580  response regulator receiver protein  44.83 
 
 
564 aa  108  1e-22  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3308  response regulator PleD  41.54 
 
 
457 aa  108  2e-22  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.268667  normal 
 
 
-
 
NC_011145  AnaeK_3557  response regulator receiver modulated diguanylate cyclase  43.51 
 
 
322 aa  107  4e-22  Anaeromyxobacter sp. K  Bacteria  normal  0.457648  n/a   
 
 
-
 
NC_009523  RoseRS_3878  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  46.51 
 
 
892 aa  107  5e-22  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1696  two component transcriptional regulator, winged helix family  44.26 
 
 
224 aa  106  6e-22  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007778  RPB_2413  response regulator PleD  41.54 
 
 
457 aa  106  6e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.592932  normal  0.173821 
 
 
-
 
NC_011004  Rpal_3541  response regulator PleD  41.54 
 
 
457 aa  106  8e-22  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_1349  two component transcriptional regulator, winged helix family  42.98 
 
 
237 aa  105  1e-21  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.421984 
 
 
-
 
NC_007355  Mbar_A3109  response regulator receiver  38.93 
 
 
285 aa  105  1e-21  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0893452  normal  0.677049 
 
 
-
 
NC_007958  RPD_3038  response regulator PleD  41.54 
 
 
457 aa  105  1e-21  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.372566  normal  0.319547 
 
 
-
 
NC_007964  Nham_2442  response regulator PleD  40 
 
 
457 aa  105  2e-21  Nitrobacter hamburgensis X14  Bacteria  normal  0.696702  n/a   
 
 
-
 
NC_010571  Oter_0959  response regulator receiver sensor signal transduction histidine kinase  42.19 
 
 
372 aa  104  2e-21  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_3625  response regulator receiver modulated diguanylate cyclase  42.64 
 
 
322 aa  104  2e-21  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2678  two component, sigma-54 specific, Fis family transcriptional regulator  44.78 
 
 
457 aa  104  2e-21  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1391  response regulator receiver sensor signal transduction histidine kinase  38.28 
 
 
373 aa  105  2e-21  Cyanothece sp. PCC 7425  Bacteria  normal  0.540189  normal 
 
 
-
 
NC_007406  Nwi_1432  response regulator PleD  40.77 
 
 
457 aa  104  3e-21  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2150  response regulator receiver Signal transduction histidine kinase  37.14 
 
 
443 aa  104  3e-21  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.394463 
 
 
-
 
NC_008347  Mmar10_1277  response regulator receiver modulated diguanylate cyclase  40 
 
 
454 aa  104  3e-21  Maricaulis maris MCS10  Bacteria  normal  0.410696  normal  0.0388481 
 
 
-
 
NC_009767  Rcas_0298  response regulator receiver modulated metal dependent phosphohydrolase  44.53 
 
 
331 aa  104  3e-21  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.7054  normal  0.177262 
 
 
-
 
NC_009523  RoseRS_0702  response regulator receiver modulated metal dependent phosphohydrolase  42.19 
 
 
331 aa  103  6e-21  Roseiflexus sp. RS-1  Bacteria  normal  0.140022  normal 
 
 
-
 
NC_007955  Mbur_0695  response regulator receiver  42.86 
 
 
170 aa  102  8e-21  Methanococcoides burtonii DSM 6242  Archaea  normal  0.412637  n/a   
 
 
-
 
NC_007760  Adeh_3473  response regulator receiver modulated diguanylate cyclase  42.64 
 
 
351 aa  102  9e-21  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_2188  response regulator receiver sensor signal transduction histidine kinase  40.94 
 
 
384 aa  102  1e-20  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00677544 
 
 
-
 
NC_007952  Bxe_B0221  GAF sensor hybrid histidine kinase  44.72 
 
 
1651 aa  102  1e-20  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3677  response regulator PleD  38.69 
 
 
461 aa  102  1e-20  Ochrobactrum anthropi ATCC 49188  Bacteria  decreased coverage  0.00345303  n/a   
 
 
-
 
NC_011884  Cyan7425_3552  Cache sensor hybrid histidine kinase  27.2 
 
 
970 aa  102  1e-20  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0338  response regulator receiver modulated metal dependent phosphohydrolase  42.55 
 
 
513 aa  102  1e-20  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.102838 
 
 
-
 
NC_010676  Bphyt_7104  multi-sensor hybrid histidine kinase  41.14 
 
 
1646 aa  102  1e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0926  response regulator PleD  41.54 
 
 
455 aa  102  1e-20  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.773886 
 
 
-
 
NC_009719  Plav_2815  response regulator receiver modulated diguanylate cyclase  38.46 
 
 
457 aa  101  2e-20  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.631579  normal  0.0857187 
 
 
-
 
NC_007413  Ava_1777  metal dependent phosphohydrolase, HD region with response regulator receiver modulation  40.88 
 
 
414 aa  101  2e-20  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_2401  phosphate regulon transcriptional regulatory protein phoB  40.98 
 
 
229 aa  101  2e-20  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3688  response regulator receiver protein  41.23 
 
 
564 aa  101  2e-20  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3131  response regulator receiver modulated diguanylate cyclase  37.65 
 
 
464 aa  102  2e-20  Jannaschia sp. CCS1  Bacteria  normal  normal  0.308445 
 
 
-
 
NC_011989  Avi_1750  response regulator PleD  40.77 
 
 
457 aa  102  2e-20  Agrobacterium vitis S4  Bacteria  normal  0.263569  n/a   
 
 
-
 
NC_009831  Ssed_2316  response regulator receiver protein  47.83 
 
 
226 aa  102  2e-20  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.00000147543  hitchhiker  0.000888492 
 
 
-
 
NC_008554  Sfum_2303  response regulator receiver protein  40 
 
 
227 aa  101  2e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_1054  response regulator receiver modulated metal dependent phosphohydrolase  36.32 
 
 
359 aa  101  3e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4702  response regulator receiver Signal transduction histidine kinase  38.71 
 
 
381 aa  100  3e-20  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0901362  normal 
 
 
-
 
NC_011726  PCC8801_3757  hypothetical protein  50.51 
 
 
163 aa  101  3e-20  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3806  hypothetical protein  50.51 
 
 
163 aa  101  3e-20  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1097  response regulator receiver modulated metal dependent phosphohydrolase  36.96 
 
 
391 aa  100  4e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.151318 
 
 
-
 
NC_008254  Meso_1348  response regulator PleD  44.62 
 
 
457 aa  100  5e-20  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2819  response regulator receiver protein  42.11 
 
 
562 aa  100  7e-20  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0360472 
 
 
-
 
NC_009485  BBta_4746  response regulator PleD  40.32 
 
 
466 aa  99.8  7e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0979514  normal  0.753316 
 
 
-
 
NC_007298  Daro_0347  PAS  37.68 
 
 
513 aa  99.8  8e-20  Dechloromonas aromatica RCB  Bacteria  normal  unclonable  0.000000072068 
 
 
-
 
NC_011146  Gbem_3274  response regulator receiver sensor signal transduction histidine kinase  39.84 
 
 
383 aa  99.8  8e-20  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0975  response regulator receiver sensor signal transduction histidine kinase  39.84 
 
 
383 aa  99.8  9e-20  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009012  Cthe_1805  response regulator receiver modulated diguanylate cyclase  40.34 
 
 
310 aa  99.4  9e-20  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0638722  n/a   
 
 
-
 
NC_002947  PP_4363  response regulator receiver protein  40.35 
 
 
563 aa  99  1e-19  Pseudomonas putida KT2440  Bacteria  normal  normal  0.470941 
 
 
-
 
NC_007005  Psyr_3451  response regulator receiver:ATP-binding region, ATPase-like:stage II sporulation E  36.09 
 
 
568 aa  99  1e-19  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.223622  normal 
 
 
-
 
NC_010511  M446_6679  response regulator receiver modulated diguanylate cyclase  36.64 
 
 
457 aa  99  1e-19  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0623  DNA-binding response regulator  39.68 
 
 
231 aa  99.4  1e-19  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000212568  n/a   
 
 
-
 
NC_008262  CPR_0609  DNA-binding response regulator  38.89 
 
 
231 aa  99.4  1e-19  Clostridium perfringens SM101  Bacteria  hitchhiker  0.0000282114  n/a   
 
 
-
 
NC_009512  Pput_1504  response regulator receiver protein  40.35 
 
 
563 aa  99  1e-19  Pseudomonas putida F1  Bacteria  normal  0.709749  normal  0.106415 
 
 
-
 
NC_004311  BRA0610  response regulator PleD  39.42 
 
 
461 aa  98.2  2e-19  Brucella suis 1330  Bacteria  normal  0.961713  n/a   
 
 
-
 
NC_011884  Cyan7425_1392  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  32.24 
 
 
584 aa  98.6  2e-19  Cyanothece sp. PCC 7425  Bacteria  normal  0.623748  normal 
 
 
-
 
NC_009767  Rcas_0845  response regulator receiver modulated metal dependent phosphohydrolase  38.41 
 
 
508 aa  98.2  2e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.903712  hitchhiker  0.00198769 
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  40.6 
 
 
379 aa  98.2  2e-19  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_009504  BOV_A0575  response regulator PleD  39.42 
 
 
456 aa  98.2  2e-19  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_2743  response regulator receiver sensor signal transduction histidine kinase  42.28 
 
 
395 aa  98.2  2e-19  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_014248  Aazo_4225  multi-sensor hybrid histidine kinase  41.18 
 
 
1322 aa  98.2  2e-19  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0102  two component heavy metal response transcriptional regulator  39.71 
 
 
223 aa  99  2e-19  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.753235  n/a   
 
 
-
 
NC_011666  Msil_0424  response regulator receiver modulated diguanylate cyclase  41.53 
 
 
469 aa  98.6  2e-19  Methylocella silvestris BL2  Bacteria  n/a    normal  0.97349 
 
 
-
 
NC_008228  Patl_1594  response regulator receiver protein  43.1 
 
 
548 aa  98.2  2e-19  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1377  two component transcriptional regulator, winged helix family  41.8 
 
 
225 aa  98.2  2e-19  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.0000000301655 
 
 
-
 
NC_011729  PCC7424_0178  response regulator receiver modulated diguanylate cyclase  32.84 
 
 
322 aa  98.6  2e-19  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.895619 
 
 
-
 
NC_013161  Cyan8802_3359  response regulator receiver sensor signal transduction histidine kinase  42.28 
 
 
395 aa  98.2  2e-19  Cyanothece sp. PCC 8802  Bacteria  normal  0.361398  normal 
 
 
-
 
NC_012850  Rleg_1382  response regulator PleD  40 
 
 
457 aa  98.2  2e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.390598 
 
 
-
 
NC_009654  Mmwyl1_2328  two component transcriptional regulator  42.28 
 
 
227 aa  97.8  3e-19  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.117296 
 
 
-
 
NC_009439  Pmen_0836  response regulator receiver protein  43.28 
 
 
395 aa  97.8  3e-19  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0500  response regulator receiver sensor signal transduction histidine kinase  42.31 
 
 
373 aa  97.8  3e-19  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_014148  Plim_2180  response regulator receiver  35.97 
 
 
151 aa  97.8  3e-19  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.269305  n/a   
 
 
-
 
NC_008609  Ppro_2062  response regulator receiver protein  42.4 
 
 
217 aa  97.8  3e-19  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2575  chitin degradation sensor protein  35.39 
 
 
1127 aa  97.8  3e-19  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0266  two component transcriptional regulator  35.81 
 
 
237 aa  97.4  4e-19  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.262207  n/a   
 
 
-
 
NC_004578  PSPTO_1278  sensory box protein/response regulator  40.65 
 
 
705 aa  97.4  4e-19  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.517683  n/a   
 
 
-
 
NC_011369  Rleg2_1290  response regulator PleD  40 
 
 
457 aa  97.4  4e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0138689  hitchhiker  0.00259394 
 
 
-
 
NC_009952  Dshi_1538  phosphate regulon transcriptional regulatory protein  38.98 
 
 
228 aa  97.4  4e-19  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.280381 
 
 
-
 
NC_013223  Dret_2242  two component, sigma54 specific, transcriptional regulator, Fis family  42.06 
 
 
464 aa  97.4  4e-19  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.719582 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  45.45 
 
 
338 aa  97.4  4e-19  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_7417  response regulator receiver modulated diguanylate cyclase  35.88 
 
 
457 aa  97.4  4e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.196799  n/a   
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  45.71 
 
 
383 aa  97.4  4e-19  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_010322  PputGB1_3924  response regulator receiver protein  36.24 
 
 
563 aa  97.1  4e-19  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_05729  putative diguanylate cyclase  40.31 
 
 
323 aa  97.4  4e-19  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
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