| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0157 |
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| Symbol | |
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| ID | 5134516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 181855 |
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| End bp | 183561 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640530480 |
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| Product | response regulator |
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| Protein accession | YP_001214998 |
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| Protein GI | 147671409 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGAGTAA TGATAGTGGA TGACCACGGT ACTAACCGTG AATTGTGCCG ATTTATCTTG
GCGCACATCG CATCACACAT AGACACTTTT GAAGATGGGC AGCAAGCGAT TGATGCAATG
CGTGAAATGG AAATCCTGCC TGATGTGATC CTGCTTGATG TGATGATGCC GATTAAAGAC
GGATTTGTTA CCGCTAAAGA GATCCGCCAA GCGTTTGTGA AGCACCATAT CCCGATCATT
TTTCTAACGG TATTAGACGA TCGCGATTCG TTTGAAAAGT GTTTGGCACT GGGGGACGAT
TTCATCCTAA AACCGGTTGA GCGTAGCGTA CTCATTGCCA AAGTACAGGC ACATTATCGC
ATTGTGAAGA TGCACAATGA GGTTATGGAA CAACGTGATG AGCTGCGCCA TTTCCGTGAG
CAAGTTCAGT ACGATTACGC GATTTCAGAA TCGATTTTCA CTAATTTGAT GGAAGAAATG
TGCCATCAAG TTGAGCACAT TTTCGGGATC CATTACATCT CTACACCATC GACTATTTTT
AATGGCGATT TGATTGTGGT CGCGAATCGG CCTCACGGCG GAGTCTATGT GATGATTGCA
GATGCCACAG GGCACGGTTT ACCTGCGGCG ATCTCGACGA TTCCCGCAAC CCGAACTTTC
TTCTCCACTG CACAAAAGGG TTTATCGCTG GGAGAGATGG TGATTGAGCT GAATCACTCT
CTAGAGCGTT TTTTGCCCGT TGGAATGATG CTGGCTGCCA GCGTGTTTGA AGTTCGCGCT
AATGGCTTTG AAATTTCTTG GTGGGGAGGT GGCTTACCTG AGGCATATTT ACTTGACCAT
CATGGGAATA TTGTGAGTCG TTTAATCTCC AACCATATGC CGCTTGGGGT ATTGCCTTCC
AATGAATTTG AGGCGGATGT GCAGCATTTC AAACTAGAGC CTAACCAAAA GCTGGTCTGC
TATACCGATG GCATTATCGA AGCGATGAAC GAACAAGGAG AGTACTTTGG CCAAGAGCGT
CTTGAACACG TTCTCACAAA GGCCTATTCC GAGGCTTTGA TTCCAACGTT GTATGATGCG
GTGAAAAAAT TTTCTAATCG GGGCAAAGGG GATGATCTCT CTATCTTGAC CATGACGTTC
CCTATCACCA ACAGTAACTC GAGCGATAAA GCCTTACCTA AGGTGGTATT GAGCTGCATC
CCCCTACAGA CAGAATTGCA TTTCCCAGCC GATGTTCTGC GTAAAATTTC CCTGATGAAT
GAAGTACGTC GATTTTTAAC CGGGATTGTC AGCGGTGGCG AGGATCTCGA CTTACTCTGT
TCAGTACTTT CAGAACTCTT TGCCAATGCT ATAGAGCACG GGTTATTGGA GCTCGATTCC
TCGTTGAAAG AAACACCGGA CGGTTTTTTT GAATTCTATC AGTTACGTGA TAAACGATTG
AAAACCTTAC CCGAATACCA TTGGCTAATC CTCAAAGTCA ATTATCAACC TGATAAGCAG
CGTATCGAAA TCGATTTAGA ACACAGTGGT AAAGGGTTTG ATTGCCAAGC ATTAAAGGAC
GCAAGCAATC AGAAAAGCTA TGGGCGAGGT ATTCTTCTTG CGACCCAGTT GTGTGAGTCC
TTGGAATACT CGAATCAAGG CCGCCGAGTG ACTGCAGTAT ACTCCTTCGC TCGCAAAGAC
ACGCTGCACT ATTCTCTGCC TAGCTGA
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| Protein sequence | MRVMIVDDHG TNRELCRFIL AHIASHIDTF EDGQQAIDAM REMEILPDVI LLDVMMPIKD
GFVTAKEIRQ AFVKHHIPII FLTVLDDRDS FEKCLALGDD FILKPVERSV LIAKVQAHYR
IVKMHNEVME QRDELRHFRE QVQYDYAISE SIFTNLMEEM CHQVEHIFGI HYISTPSTIF
NGDLIVVANR PHGGVYVMIA DATGHGLPAA ISTIPATRTF FSTAQKGLSL GEMVIELNHS
LERFLPVGMM LAASVFEVRA NGFEISWWGG GLPEAYLLDH HGNIVSRLIS NHMPLGVLPS
NEFEADVQHF KLEPNQKLVC YTDGIIEAMN EQGEYFGQER LEHVLTKAYS EALIPTLYDA
VKKFSNRGKG DDLSILTMTF PITNSNSSDK ALPKVVLSCI PLQTELHFPA DVLRKISLMN
EVRRFLTGIV SGGEDLDLLC SVLSELFANA IEHGLLELDS SLKETPDGFF EFYQLRDKRL
KTLPEYHWLI LKVNYQPDKQ RIEIDLEHSG KGFDCQALKD ASNQKSYGRG ILLATQLCES
LEYSNQGRRV TAVYSFARKD TLHYSLPS
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