| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2887 |
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| Symbol | |
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| ID | 4076421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3056120 |
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| End bp | 3057391 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638008216 |
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| Product | response regulator receiver modulated serine phosphatase |
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| Protein accession | YP_614881 |
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| Protein GI | 99082727 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCCAG AGCATTCAAT TGAAGGTGAA GACGTGCCTG TAAGCGGGTC CATCCGACGA
GTGTTGGTGG TGGACGATAG CCGCTTGCAG CGTCGAATCC TTGTCGCTTC CCTCAAGAAG
TGGGGCTTTG ACGTCGTCGA AGCCGAGAGC GGCGAGGATG CGATGGACAT CTGCCGCGCC
GATCCGCCTG ATCTCATCCT GAGTGACTGG ATGATGCCGG GGATGAACGG CATTGAATTT
TGCCGCGCCT TTCGCGCCGA CTCGCATGAA ACCTATAGCT ACTTTATTCT GCTGACCTCA
AAGAGCGAGA AAAACGAAGT AGCAGAGGGG CTTGATGCCG GCGCGGATGA TTTTCTGACC
AAGCCTGTAA GCTCGGACGA GCTGCGCGCC CGTATCTCTG CGGGGGAGCG GATCCTGCGT
ATGCAGCGCG AACTCTTTGA GAAAAACCGG ATTGTGTCGG AAACGCTGGA TGAGTTGCAG
ACCGTATATG ATGCGATCGA CAAGGACCTT ATTCAGGCCC GCAAGATCCA GGAATCTCTG
GTTCCGGAGC TGACCCGTGC TTTCGGCGCG TCAGAGGTAA ACCTGCTGCT GAAGCCCTGT
GGACATATCG GTGGTGATCT GGTCGGAATG TTCTCGCCGG GGATCAATCG CCTCGGCTTT
TACTCCATCG ATGTTTCGGG ACATGGCATC ACCTCCGCGA TGATGACCGC ACGGCTGGGG
GGCTATCTGT CCTCGACCTA TTTCGACCAG AACGTCGGAA TGGAAAAGAA ATTCAACCGT
TTCTACGCTC TGCGCCCCCC GGAAGAGGTT GCGAGTGTCC TGAATGCCCG TTTGATTGCC
GACACCGGGA TCGAAGAGTA TTTCACGATG GCCTACTGCA TCGCGGACCT GCGCACGGGC
GTCATCAAGA TGGTTCAGGC CGGCCATCCT CACCCACTGC TTTTGCGCGC GGATGGCTCG
ATGGAGTTCA TTGGCAAAGG CGGGGTGCCG GTCGGGCTCG TGCCCGATGT TGCCTATGAG
CAAGAAGAAT TTGTGATGGA GAAGGGTGAC AGGCTGCTTC TCTATTCAGA TGGTTTCACA
GAAGCGCATC TCAAAGACGG ATCTATGCTC GACACCGAAG GCCTGGTCGA GTTGGTCAAC
CGCTGTGACC CAAGGCGCAG CGGCAAGGAA TTCCTCGACG ACCTCTATTG GCACCTCACG
CAAGTGATGG GCGATGACAA AGGGCTGGAG GACGATATTT CTGCCACCCT GTTTGAGTTT
CAAGGCCCTT AG
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| Protein sequence | MLPEHSIEGE DVPVSGSIRR VLVVDDSRLQ RRILVASLKK WGFDVVEAES GEDAMDICRA
DPPDLILSDW MMPGMNGIEF CRAFRADSHE TYSYFILLTS KSEKNEVAEG LDAGADDFLT
KPVSSDELRA RISAGERILR MQRELFEKNR IVSETLDELQ TVYDAIDKDL IQARKIQESL
VPELTRAFGA SEVNLLLKPC GHIGGDLVGM FSPGINRLGF YSIDVSGHGI TSAMMTARLG
GYLSSTYFDQ NVGMEKKFNR FYALRPPEEV ASVLNARLIA DTGIEEYFTM AYCIADLRTG
VIKMVQAGHP HPLLLRADGS MEFIGKGGVP VGLVPDVAYE QEEFVMEKGD RLLLYSDGFT
EAHLKDGSML DTEGLVELVN RCDPRRSGKE FLDDLYWHLT QVMGDDKGLE DDISATLFEF
QGP
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