| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000121 |
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| Symbol | |
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| ID | 8558426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 135881 |
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| End bp | 136840 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646407786 |
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| Product | response regulator |
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| Protein accession | YP_003287274 |
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| Protein GI | 262395421 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0601608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACCGA CAGGGACATC AATGCGAATC CTCCTGGTTG ACGATGTTCA GCTAGACAGG
ATGCAGTTGG CTATTCGTCT TAAGCAACTT GGACATATTG TAAAAGCGGT GGGGAGTGGG
CTAGAAGCAC TAAACACCTA CGAGAGTTTT GATCCTGAAC TGGTATTACT CGATATATCG
ATGCCAGATA TGAACGGTTT TGAAGTCTCT CTTCATATCA GAGAAACCTT TCCCGACTGG
ATCCCAATAA TTTTCCTGAG CAGTCACGAA GAGCCAGAAA TGATTGCAAA AGCCATAGAG
GCCGGCGGTG ATGATTATTT AATTAAACCC GTAGATAAAC TCGTACTGAA CTCTAAGCTT
ATCGCAATGC AGCGTATTGC CCATATGAGA CGAGAGCTTA AACAAGCGAC AGCTCAATTG
GAGAAAGTGA ACCAACTTTT GACCCAGCAA GCGAATGAAG ATGGCTTAAC CAAACTCTAT
AACCGTCGTT ATATCGATCA TAAGTTAGAA TCGATGGTTG CATGGCATGG CCGTCACAAC
ATGCCAATGG CTTTGATTTT ATTGGACGTC GATTTTTTCA AACCGTTTAA TGATAATTAC
GGTCATATAG AAGGAGATCG TTGCTTGCAA GCCATTGCGA ACCAACTTAA AGCAACATTT
TGTCGCTCTG GCGAATACGT AGGGCGCTAT GGCGGAGAAG AGTTTGTGGT GTTACTGGGT
TGCACAGACG CCCAAACCGC AGAGAGAGAA GCAGAACGTA TACAAGAGGC CATGTACTTT
CTGGATTACC CACATGAGTA TTCTAGTGTG TCCAATAGGG TGACAGTGTC ACAGGGTGTT
TTTGTTTTTC AACCAACGGG AAAAGAGCAG CAGTCTGATT TGTATGCGAC GGTGGATAGA
GCGCTGTATA CCTCAAAGTC TTTAGGAAGA AATACACATA CGGTGGTAAA TGCAAGTTGA
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| Protein sequence | MQPTGTSMRI LLVDDVQLDR MQLAIRLKQL GHIVKAVGSG LEALNTYESF DPELVLLDIS
MPDMNGFEVS LHIRETFPDW IPIIFLSSHE EPEMIAKAIE AGGDDYLIKP VDKLVLNSKL
IAMQRIAHMR RELKQATAQL EKVNQLLTQQ ANEDGLTKLY NRRYIDHKLE SMVAWHGRHN
MPMALILLDV DFFKPFNDNY GHIEGDRCLQ AIANQLKATF CRSGEYVGRY GGEEFVVLLG
CTDAQTAERE AERIQEAMYF LDYPHEYSSV SNRVTVSQGV FVFQPTGKEQ QSDLYATVDR
ALYTSKSLGR NTHTVVNAS
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