Gene Mmc1_0435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0435 
Symbol 
ID4483922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp521718 
End bp522839 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content51% 
IMG OID639721182 
Productresponse regulator receiver protein 
Protein accessionYP_864366 
Protein GI117923749 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0149866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGGAA TAGGTACCGT GCGGAAAATT TTAATTGTAG AAGATGATGA AACCAGCGCT 
TGGTTGCTGG AGAGTTTTTT GCGTAGCGAG GGTTACGAGG TCATTCTGGC GCGGGATGGT
TTTGCAGCGG TTGAGCGCTA TCAATCGGCC GATCCAGATC TGATTATTAT GGATATCCTG
TTGCCCGGTC AGGATGGCTA TGCGGCCACC GAGCAGATAC GCGCCATCAC TCGGAATGAG
GATTCACCGC CCCCCATTAT CTTTCTCACC GCCATTGAGA GTGATGCCGA ACTGGCCCGC
TGTCTGGATT GTGGGGGGGA TGATTTTGTG GTTAAACCTT TTAATCCCAT CATCTTGAAA
GCCCGTATCC ACTCCCTATT AGAGCGTTTG GCCTTGGCTG AAGAGAAGCA GCTTGCCCTG
TTTCAGATCG CCTCCGTGTT GGACAAACTC AGGCAGAGCA GCCATTTTCA AACCAGTGAT
TTGGTTTTTC TGGAAAGGCC GTTAGGGCGC ATTAGTGGGG ATGTGGTGCT CTCGACCAGT
AAAGCCAATG GGAACCGTCT GGTTGTGATT GGTGATTTTA CGGGCCATGG TCTGCCAGCG
GCTATCTGTG GTTCCTTGGT GATTCCCCTG TTTTATGAGA TGGCCGCAGC GGATGCGGAC
ACGGAATCCA TTATCGGCTC GATCAATACA ACGCTGTATG AAAAACTGCC CAGTGGTTTT
TTTATGGCGG CCTCTGTTAT CGAGTTTAAT CCCCACGCCA AGCAGGTAAC CTTCTGGAAT
TTTGCAGCAC CGGGTTGCTT TATCCGGCGA GGGGAGGCGT GGCAGGCCTA CCCCCTTTAT
CAATTGCCCT TGGGCGCAGT GGAGCAGTTG CCAAAGCCTT TGGAGTCGGC AACTCTGGCG
GTTCAATCCA ACGACCGCGT TTATGCCTAT TCCGATGGTC TGTGTGACAC CCTTGGGGTA
ATGTTGGAAA AGGATGATCC CACACCCTTG ATCCAATTTT TAGACCAGCT ATTCTGTTGC
GAAGCGACGG AAGGTGCCAT TACGGCCCTG CCACAACCCT TGCTCGATCA ATTGACGGGT
GCCTATGATG ATATTACAGC GGTGGTCTTG ACCATTCCTT AA
 
Protein sequence
MLGIGTVRKI LIVEDDETSA WLLESFLRSE GYEVILARDG FAAVERYQSA DPDLIIMDIL 
LPGQDGYAAT EQIRAITRNE DSPPPIIFLT AIESDAELAR CLDCGGDDFV VKPFNPIILK
ARIHSLLERL ALAEEKQLAL FQIASVLDKL RQSSHFQTSD LVFLERPLGR ISGDVVLSTS
KANGNRLVVI GDFTGHGLPA AICGSLVIPL FYEMAAADAD TESIIGSINT TLYEKLPSGF
FMAASVIEFN PHAKQVTFWN FAAPGCFIRR GEAWQAYPLY QLPLGAVEQL PKPLESATLA
VQSNDRVYAY SDGLCDTLGV MLEKDDPTPL IQFLDQLFCC EATEGAITAL PQPLLDQLTG
AYDDITAVVL TIP