| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3924 |
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| Symbol | |
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| ID | 5871718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4367710 |
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| End bp | 4369401 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549046 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001670150 |
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| Protein GI | 167034919 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCCG AACAGGCGTT GACCGTGCTG GTCGCCGAGG ACGGGGCCGC CGACCGCCTG
TTGTTGGCGC AGATCGTGCG CCGTCAGGGC CACCAGGTCG TCACCGCGGA AAACGGCGAG
CAGGCGGTAG CGCTGTTCAT CGAGCGGCGC CCGCAGTTGG TGCTGCTCGA TGCGCTGATG
CCGGTGATGG ACGGCTTCGA GGCGGCGCGG CAAATCAAGG CCCTGGCGGG CGAAGCGCTG
GTGCCGATCA TTTTCCTGAC CTCGCTGAAC GAGGAGGAAG GCCTGGTGCG CTGCCTGGAA
GCGGGTGGCG ATGACTTCAT GGCCAAACCC TACAGCGCGG TGATCCTCGC CGCCAAGATA
CGCGCCATGG ACCGCCTGCG CCGGTTGCAG GCCACTGTGC TGGAGCAGCG CGACCAGATT
ACCCGGCACC ATCACCACCT GCTGAACGAG CAGCGGGTGG CCAAGGCAGT GTTCGACAAG
GTAGCCCACT CCGGCTGCCT TGGCGCGCCC AACATCCGCT ACCTGCAATC GCCCTACGCG
CTGTTCAATG GCGACCTGAT GCTGGCAGCG TTTACCCCGG CCGGCGATAT GCGCGTACTG
CTCGGCGATT TCACTGGGCA TGGCTTGCCG GCGGCGGTCG GCGCCATGCC ACTGGCCGAG
GTGTTCTACG GCATGACCGC CAAGGGCTAC GGTATGGCGC AGATCCTGCG CGAGATGAAC
GCCAAGCTCA AACGTATCCT GCCAGTGGAC ATGTTCTGCT GCGCGCTACT GCTCAACCTC
AGTATGCAGC GCGGTTCGGT GGAGGTTTGG AATGGCGGCA TGCCTGATGG TTATCGCCTG
TCGGTGGATG GCCAGGTGCT GTCGGTGCTG AATTCACGGC ACCTGCCGCT GGGCATTCTC
GCTGCCGAGC GCTTCGATGA CAGCACTGAA GTGTTGCCGC TGGCGCCGGG CGAGCGCCTG
TTGCTGCTGT CGGACGGCGT ACTCGATACC GCCGACGACC AGGACCGCTT GTTTGGCGTG
CAGCGCCTAC GTCAGGTGCT GGCCGACAAC CGCGACCCAG CGCAGTTGTT CGATGAACTG
ATGCAGGCCC TGGAGCGCTT TGGTGGGCGC CCACGCGATG ACATCAGCTT GTGCGATATT
CGCATGTTCA CCGCCGAGGA GCGGGTGCCG GCGCCGATGA TCTACTCTGA TAGCGGCCGC
TCCAGCCCGC TGGACTGGTC GCTGGGCTTC GAGGTGCGTG GCGAGAGCCT GAAACGCTTC
AATCCGGTGC CGTATCTGGT GCAGTTGTTG CAGGAAATTC ACGGCCTGCG CGCGCGCACC
GGCAGCCTGC ACAGTGTGCT CAGCGAGTTG TATTCCAATG CATTGGAGCA TGGTGTGCTG
GGCCTGGATT CTCAGCTCAA GCGCGATGTG CAGGGCTTTG CCGACTATTA TCAGGAGCGC
GCGCGGCGCC TGGGGTCGTT GACAGGCGGC TTTGTAAGCA TCGATTTCAA GGTTGAACCC
CATGGCGACG GTGGCCGTCT GAAGATTCAG GTGCGCGACA GCGGTGCCGG CTTCGACGTG
CAGCGGGTAC TTGCGCGGCC CTCGCGGGAT CAGGGGCTTA GCGGCCGTGG TCTGAACCTG
GTTCGGCGGT TGGCCAGTGA CGCGCGCTGG AGTGATGGCG GGCGTTGCGC GCAAGTGGAG
TTCGTATGGT GA
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| Protein sequence | MPAEQALTVL VAEDGAADRL LLAQIVRRQG HQVVTAENGE QAVALFIERR PQLVLLDALM
PVMDGFEAAR QIKALAGEAL VPIIFLTSLN EEEGLVRCLE AGGDDFMAKP YSAVILAAKI
RAMDRLRRLQ ATVLEQRDQI TRHHHHLLNE QRVAKAVFDK VAHSGCLGAP NIRYLQSPYA
LFNGDLMLAA FTPAGDMRVL LGDFTGHGLP AAVGAMPLAE VFYGMTAKGY GMAQILREMN
AKLKRILPVD MFCCALLLNL SMQRGSVEVW NGGMPDGYRL SVDGQVLSVL NSRHLPLGIL
AAERFDDSTE VLPLAPGERL LLLSDGVLDT ADDQDRLFGV QRLRQVLADN RDPAQLFDEL
MQALERFGGR PRDDISLCDI RMFTAEERVP APMIYSDSGR SSPLDWSLGF EVRGESLKRF
NPVPYLVQLL QEIHGLRART GSLHSVLSEL YSNALEHGVL GLDSQLKRDV QGFADYYQER
ARRLGSLTGG FVSIDFKVEP HGDGGRLKIQ VRDSGAGFDV QRVLARPSRD QGLSGRGLNL
VRRLASDARW SDGGRCAQVE FVW
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