Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BT9727_0915 |
Symbol | rsbU |
ID | 2857911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
Kingdom | Bacteria |
Replicon accession | NC_005957 |
Strand | + |
Start bp | 1011333 |
End bp | 1012475 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637512351 |
Product | sigma factor sigB regulation protein |
Protein accession | YP_035254 |
Protein GI | 49480182 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.00116334 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCATTT TAATTGTCGA TGATAATCCG GTTAACATCT TTGTAATTGA AAAGATTTTA AAACAAGCCG GATATCAGGA TCTTGTATCG CTGAATTCTG CACAAGAGCT TTTCGAATAC ATACAGTTTG GAAAAGATTC TTCCAGGCAT AATGAAATTG ATTTAATACT ATTAGATATT ATGATGCCTG AAATTGATGG ACTTGAAGTT TGTAGGCGAT TACAAAAAGA GGAGAAGTTT AAAGATATTC CTATTATTTT TGTTACAGCT TTAGAAGATG CAAATAAATT AGCTGAAGCT CTTGATATGG GGGCAATGGA TTATATTACG AAACCTATAA ATAAAGTTGA GTTGTTAGCG CGTATGCGTG TAGCATTACG CTTGAAATCG GAATTAAATT GGCATAAAGA ACAGGAAGAG AATCTTCGGA ATGAACTAGA TTTAGCTACG CAAGTACAAA GAAACTTATT AAGTAGCCCA TTAAGAGAAG AGCATATAAA AATTGAAGCA AGTTACTTAC CTTCATTTAA ACTAGCTGGA GATATGTATT ACTGGTATAA AATCGATGAA AACCGCTACG GTATTATATT ATTAGATGTG ATGGGACATG GTGTATCTGC TTCCTTAGTT TGTATGTTCA TTTCGTCTGT ATTACGTGAA ACGATTAAAT GTTTAATCGA TCCAGAACTC GTTATGAAAG ACTTAAATAA ATATATGACT CTTTTACATA ATGAGAATGA CAATATTCCA TATTATTTTA CAGCGATATA CTTAGTAGTT AATACAGAAG ATAGAACGAT TGAATATGTA AATGCAGGAC ATCCTTCTGG ATATGTTTTA GTTGATGAAA CAAATGTAGT TGAACTAAAT CGCGGGAGTT GTGCGGTAGG ATTTTTTGAT GAGATAAAAG TTGAAAAGAC AGTTATACCT TTTGAGAAAA ATGCTCAAAT CGTATTGTTT ACAGATGGCG TTCTTGAAGC AATTGCAAAT GATGAATTTG AGGCTGAAGA GAAATTACGT ACTTTTACAG AAAGAAAATG GGGAGAGCTA GAAGAAGAGA TAGAAGGGTT TTACAAGGAA GAACAGAAGG AAGCACAATC AGATGATATG TGTCTCATTA TGATACAAAC GAATGCGAAA TAA
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Protein sequence | MSILIVDDNP VNIFVIEKIL KQAGYQDLVS LNSAQELFEY IQFGKDSSRH NEIDLILLDI MMPEIDGLEV CRRLQKEEKF KDIPIIFVTA LEDANKLAEA LDMGAMDYIT KPINKVELLA RMRVALRLKS ELNWHKEQEE NLRNELDLAT QVQRNLLSSP LREEHIKIEA SYLPSFKLAG DMYYWYKIDE NRYGIILLDV MGHGVSASLV CMFISSVLRE TIKCLIDPEL VMKDLNKYMT LLHNENDNIP YYFTAIYLVV NTEDRTIEYV NAGHPSGYVL VDETNVVELN RGSCAVGFFD EIKVEKTVIP FEKNAQIVLF TDGVLEAIAN DEFEAEEKLR TFTERKWGEL EEEIEGFYKE EQKEAQSDDM CLIMIQTNAK
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