| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05599 |
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| Symbol | |
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| ID | 5558713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 800262 |
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| End bp | 801944 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640910075 |
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| Product | response regulator receiver |
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| Protein accession | YP_001447729 |
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| Protein GI | 156976823 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCCA TATTGTTGGT TGACGACAGC AAAACGGTTC TGCTCTACAT GACCAGTGCA
TTGCAAAAGC AAGGGTACGA GGTCATTGCC GTTGAAGATG GTGAGTCTGC GTTAGAAGTA
CTGAATCACC GCACTGACAT TCAGTTTGTC CTCAGTGATT TGATGATGCC GGGCATTAGT
GGCATTGAGC TTTGTCGTGA GCTTAAGTCG TCGGCGTTTT CTCGTTATAT CTTCTTTGTT
CTCCTTTCTT CATATAACGA TGAAGAATCC ATCATCAAAG GCATGGATGC AGGTGCCGAT
GACTTTGTTG ATAAGAAGAC CTCTGTCGCT GAGCTGCAAG CGCGGATTCG AGCGGGTTTT
CGTACTTTAG AGCTGCACTA TACGCTCACG ACAAAAAACC AAGAGCTCGA TTTAGCGTAT
CAAACCATTC AGCAGGATCT GGATTCTGCT GGAGAGTTAA TGGGGCAACT GTTGCCCGTT
GAAGAACAGA TTCACACGGC ACAATTTAGA TTCACTTATG TCCCTTGTAC CAAGATCGGT
GGGGATATGT TGGGTTATGT CGAGCTTGAT GAATCGCATG TTGCGTTTTA TGTCTTCGAT
GTTTCCGGGC ACGGTATTTC TTCGGCGTTA ATGGCGTTCT CGATTCAACA GGCTTTGTTA
CAACGTAACA AATTGGAGTC GATAACGTTA GATTGGAGTG ACAACGAATA CCGCATCAGT
AAGCCTGCGG CTGTGATTGA AAGGCTCAAT CGACGCTACC AGCAAACGCA GAACGGCAAG
CTCTATTTCA CTATCGAATA CGCCGTGTTG AACACCAAAA CCGGTGAACT AAACTATTGC
ACAGCAGGGC ATCCTAAATT TGTTTGGCAA CAGACGAAAC AAAACCGCTT GGAACTTGTT
GGCGACAACA ACTTCATTGT CGGGGCATTG GAGCCAATGA TATACCAAGG TGGACGTATC
CAACTCAAGC CTGATGACGC GCTTTGGTTT TTCTCCGATG GCTTATTGGA AGCTAAGCAA
GGCGAGGAGC TTTACGGCAT TGACCGACTG TTAGTCAACA TCGAAAGGAG TAAAGCGATG
CCAGAAAAAG CACAAACTAA TGCTGTTTTA AAGCAAGTGC AAAACTGGCA AGGAAAACCA
GAACTCGACG ATGATGTGAG CTTGTTGAAA GTGCAATGGT TGGGCTGTGC ACAATCGCGA
GCCGTTAATT CGCCGAGGGT GGTGTTCCAG AAATCCTATC AAGCATCTTT AGAAGTTTCG
CGCCAAGCGA GTCTCGAATT GGTTGAGTTC CTTCAACAAC ATTCGGTTTC TTCTCATGCC
ATGCAAGCGT TGGAGTTATG TGTGGTAGAA CTCATGAACA ATGCGTTTAT TCATGCCTAC
CAAGAGCAAG CAGGGAAAAC GGTTGAGTTA GAATGCGAAG TGCTTCGAGG TGAAAAAACA
AAAGTTGAGC TGCGCGTGGC TGATTACGGA AACGGTATTG ATGACGACAC GTTCAAAGGT
CACATCTCTA AGCAAATTGA AGCCCCTAAC TTGCTCGATG AAGACAGTTG GTTGCCTTCT
GGGCGAGGGC TAATATTGAT CGCTCAAATG ACAAACGGGT TTTCTGTATC ACATCAAGGG
GAGCGTAATT GTTTTACGGT GGTGATATCT CTCGACGAAA AGGCAAAGTC TATAATTCTT
TAA
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| Protein sequence | MKSILLVDDS KTVLLYMTSA LQKQGYEVIA VEDGESALEV LNHRTDIQFV LSDLMMPGIS
GIELCRELKS SAFSRYIFFV LLSSYNDEES IIKGMDAGAD DFVDKKTSVA ELQARIRAGF
RTLELHYTLT TKNQELDLAY QTIQQDLDSA GELMGQLLPV EEQIHTAQFR FTYVPCTKIG
GDMLGYVELD ESHVAFYVFD VSGHGISSAL MAFSIQQALL QRNKLESITL DWSDNEYRIS
KPAAVIERLN RRYQQTQNGK LYFTIEYAVL NTKTGELNYC TAGHPKFVWQ QTKQNRLELV
GDNNFIVGAL EPMIYQGGRI QLKPDDALWF FSDGLLEAKQ GEELYGIDRL LVNIERSKAM
PEKAQTNAVL KQVQNWQGKP ELDDDVSLLK VQWLGCAQSR AVNSPRVVFQ KSYQASLEVS
RQASLELVEF LQQHSVSSHA MQALELCVVE LMNNAFIHAY QEQAGKTVEL ECEVLRGEKT
KVELRVADYG NGIDDDTFKG HISKQIEAPN LLDEDSWLPS GRGLILIAQM TNGFSVSHQG
ERNCFTVVIS LDEKAKSIIL
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