| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4363 |
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| Symbol | |
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| ID | 1041733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4952739 |
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| End bp | 4954430 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637147759 |
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| Product | response regulator receiver protein |
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| Protein accession | NP_746477 |
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| Protein GI | 26991052 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.470941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCCG AACAGGCGTT AACCGTGCTG GTCGCCGAAG ACAGTGCTGT CGATCGCCTT
CTGCTTGCGC AGATCGTGCG TCGCCAGGGG CATCAGGTAT TCACCGCTGA AAACGGCGAG
CAGGCGGTAG CGCTGTACCT CGAGCGGCGC CCGCAACTGG TGCTGCTGGA CGCCCTGATG
CCGGTCATGG ATGGCTTCGA GGCGGCGCGG CAGATCAAGG CATTGGCTGG CGAAGCGCTG
GTGCCGATCA TTTTCCTGAC GTCGCTGAAT GAAGAAGAGG GGCTGGTGCG TTGCCTGGAG
GCGGGGGGCG ATGATTTCAT GGCCAAGCCC TACAGCGCGG TGATCCTGGC TGCCAAGATT
CGCGCCATGG ACCGCCTGCG TCGCTTGCAG GCAACGGTAC TGGAACAGCG TGACCAGATC
ACCCGGCATC ACCATCACCT GCTTAACGAG CAGCGGGTCG CCAAGGCGGT GTTCGACAAG
GTGGCCCACT CTGGTTGCCT TTCTGCGCCC AACATTCGCT ACCTGCAATC GCCTTACGCG
CTGTTCAATG GCGACCTGAT GCTGGCGGCA TTTACCCCGG CCGGCGACAT GCGTGTGCTG
CTTGGCGATT TCACCGGTCA CGGCCTGCCG GCGGCGGTCG GCGCCATGCC GATGGCTGAG
GTGTTCTACG GCATGACCGC CAAGGGCTAC GGCATGGCGC AGATCCTGCG CGAGATGAAT
GCCAAGCTCA AGCGCATCCT GCCGGTGGAT ATGTTCTGCT GTGCGCTGCT GCTCAATCTC
AGCATGCAGC GCGGCTCGGT GGAGGTGTGG AATGGCGGTA TGCCTGATGG CTATCGCCTG
TCGGTGGATG GCCAAGTGCT GTCGGCACTG AGTTCGCGGC ACCTGCCGCT GGGCATTCTG
GCCGCTGAGC GTTTCGATGA CAGCACGGAG GTGTTGCCGC TGGCACCGGG CGAGCGCCTG
TTGCTGCTGT CAGACGGTGT GATCGATACC GCCGACGACC AGGAATGCCT GTTTGGCGTA
CAGCGCCTGC GAGCGGTGCT GGCCGACAAC CGCGACCCGG TGAAGTTGTT CGATGAGCTG
ATGCTGGCCC TGGAGCGTTT TGGTGGGCAG CCACGCGATG ACATCAGCTT GTGCGATATT
CGCATGTTCA CTGCCGAGGA GCGGGTGGCG GCCCCGATGA TCTACTCTGA TAGTGGCCGC
TCCAGCCCGC TGGACTGGTC GCTGAGCTTC GAGGTGCGTG GCGAAAGCCT GAAACGCTTC
AACCCTGTGC CGTACCTGGT GCAGTTGTTG CAGGAAATTC ATGGCCTGCG CGCACGTACC
GGCAACCTGC ACAGTGTGCT TAGCGAGTTG TATTCCAATG CGCTGGAGCA TGGTGTGCTG
GGCCTGGACT CGCAGCTCAA GCGCGATGTG CAAGGCTTTA CCGACTATTA CCAGGAGCGT
GCCCGGCGCC TGGGTTCGCT GACCGAAGGC TTTGTAAGCA TCGATTTCAA GGTTGAACCG
CATGGCGGCG GTGGGCGTCT GATGATCGAG GTGCGCGACA GCGGTGCCGG CTTCGACGTG
CAGCGCGTGC TTGCGCGGCC TTCGCCGGAC CAGGGGCTGA GCGGCCGCGG TCTGAATCTG
GTGCGGCAGT TGGCCAGTGA CGCGCGCTGG AGTGAGGGCG GGCGTTGCGC GCATGTGGAG
TTCGTATGGT GA
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| Protein sequence | MPAEQALTVL VAEDSAVDRL LLAQIVRRQG HQVFTAENGE QAVALYLERR PQLVLLDALM
PVMDGFEAAR QIKALAGEAL VPIIFLTSLN EEEGLVRCLE AGGDDFMAKP YSAVILAAKI
RAMDRLRRLQ ATVLEQRDQI TRHHHHLLNE QRVAKAVFDK VAHSGCLSAP NIRYLQSPYA
LFNGDLMLAA FTPAGDMRVL LGDFTGHGLP AAVGAMPMAE VFYGMTAKGY GMAQILREMN
AKLKRILPVD MFCCALLLNL SMQRGSVEVW NGGMPDGYRL SVDGQVLSAL SSRHLPLGIL
AAERFDDSTE VLPLAPGERL LLLSDGVIDT ADDQECLFGV QRLRAVLADN RDPVKLFDEL
MLALERFGGQ PRDDISLCDI RMFTAEERVA APMIYSDSGR SSPLDWSLSF EVRGESLKRF
NPVPYLVQLL QEIHGLRART GNLHSVLSEL YSNALEHGVL GLDSQLKRDV QGFTDYYQER
ARRLGSLTEG FVSIDFKVEP HGGGGRLMIE VRDSGAGFDV QRVLARPSPD QGLSGRGLNL
VRQLASDARW SEGGRCAHVE FVW
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