| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1432 |
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| Symbol | |
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| ID | 5661829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1740608 |
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| End bp | 1741831 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641235994 |
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| Product | response regulator receiver modulated serine phosphatase |
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| Protein accession | YP_001501292 |
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| Protein GI | 157961258 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTAA CATTGAAGCT CATCAGCCAG CATAAAATCA TCGTCGTAGA AGACTGCTAT
AGCGAGCGTT GTTTGCTACT GACTTTACTC GAGTCAATGG GGTTTACGGC TCAAGGTTTT
TCTAATGCCC AAGAGGCCAT AGAACTGCTT CAGCGTGAGC ATGTCGACAT GGTGATCACC
GATTGGATGA TGCCTAAGAT CAGCGGTATT GAGCTATGTA AAACTATAAA ATCAATGCCT
TGCTCGCCAT ATACCATATT ACTCACGGGT AATAGCCAGA ATGCTCATCT AATAGAAGGG
ATCGAATCTG GCGCCGATGA CTTTATTGCA AAGCCCTTTC ATAGCGGCGT CCTGAAAGTA
AGAATTCTTG CAGGCTTACG GATCATCGCG ATGCAACAGA AATTAGAAAG TCACAATCAA
GCGCTCAATA ATATGCTGCT AAAAGAGCAA GGTTACCTTA ATAATCTTAA ACATGACCTG
TCTCTCGCCG CTCAGCTGCA ACGCGCTCTA CTTCCCAAGA ACTCAGATTT AAGCCAAGGC
TGGCGAGTCA CAACGGAATT TAAACCAGCC CAAGATCTCG CAGGCGATCT GTTCCAATGC
TTCAATATCG ACAAGCAGCA TATCGGCTTT TACCTATTGG ATGTCAGCGG TCATGGTACG
GCGGCATCGA TGCTAAGCTT TACCCTAGCG CACCACTTAT CTAGCAGCCA GCAAATTTGG
CAGTCACTTG ATTTGGCACA GATAACTAAC AAACTCAATC GAGAGTTTGA CGACCCAGAG
CAGTGTGGAC GCTTTGCAAC ACTACTTATT GGCATCGCAG ACACTAACAG CGGAGAGGTT
GAGATTATCA ACGCTGGGCA CCCCTCTCCT ATCATAGTGG GCCCACAAGG CGCTAGATTT
GTCGATGATA ACCACCTTGG ATCACAGCTA CCAATTGGCA TCAACAAACA GCACAGTTAC
CACAGCCAAC ATTTCACCTT AGAGAAAGAA GAGCAGCTAC TGCTCTATTC TGATGGCATT
TATGAATGTC GCAACAGTAA ATTTGGTAGT TTTGGCTTAG CAAAACTACT GAAAAATATC
AGTGATGCCA GAGAGCTACC TGCAGAAAAG TTATTGCACT ATCTCAGCTA TAGCACTGAG
CTTTGGCAAG AAAAACAAGC TCAGGACGAT ATCTCTCTGA TGCTAATCTC AACCACAACT
CACTTAGCCC ATTGTGATTC TTAA
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| Protein sequence | MPLTLKLISQ HKIIVVEDCY SERCLLLTLL ESMGFTAQGF SNAQEAIELL QREHVDMVIT
DWMMPKISGI ELCKTIKSMP CSPYTILLTG NSQNAHLIEG IESGADDFIA KPFHSGVLKV
RILAGLRIIA MQQKLESHNQ ALNNMLLKEQ GYLNNLKHDL SLAAQLQRAL LPKNSDLSQG
WRVTTEFKPA QDLAGDLFQC FNIDKQHIGF YLLDVSGHGT AASMLSFTLA HHLSSSQQIW
QSLDLAQITN KLNREFDDPE QCGRFATLLI GIADTNSGEV EIINAGHPSP IIVGPQGARF
VDDNHLGSQL PIGINKQHSY HSQHFTLEKE EQLLLYSDGI YECRNSKFGS FGLAKLLKNI
SDARELPAEK LLHYLSYSTE LWQEKQAQDD ISLMLISTTT HLAHCDS
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