| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0071 |
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| Symbol | |
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| ID | 3932507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 65165 |
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| End bp | 66445 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637902412 |
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| Product | response regulator receiver (CheY-like) modulated serine phosphatase |
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| Protein accession | YP_508013 |
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| Protein GI | 89052562 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGCAT CACTTCCCAA AGTAGCGGCG GGTCGCCCCG CGGCCGTGGA CCCGGAGCCA
GACGCGCTGA CCGTGTTGGT GTTGGATGAC AGCCCCGCGC AGCGCAACAT GGTGTGCGCG
CTACTGCGCC GTTGGGGGCA TACGGCCATA TCAACCGGCG ATCCGGTGGA AGCGCTGGCC
CGCGCGCGGG AACCGGACAT CTCCTTGATT CTGTGCGACT GGATGATGCC GGAGATGACG
GGGCCGGAGT TCTGTCATCG CCTGAGGTCG GAGGTGACGG ACACCTATCC TTATGTTTTG
CTGCTCACCT CCAACACCGA CCGGGGGGCC GTAGCCGAAG GGCTCGCGGC CGGCGCGGAT
GACTTCCTCA ACAAACCCGT GCGTCCGCCA GAGTTGCAGG CCCGCATGAA TGCCGGCGCG
CGCATCGTTG CCATGCAGCA GGAACTGCGC GCCAAGAACG GGTTGCTGGA AACGACGCTG
GACGAGTTGC AGTTGCTCTA CGATGCCATT GACCGTGACC TTGATGAGGC GCGGCGCCTG
CAAATGGCGT CCTTGCAAGA CACTCACCGT CCGTTCAAAG GCGGTGACGT ATCGTTGCTG
TTGGAGGCCA GCGGTCATGT CGGCGGCGAC ATGGTGGGAT ATTTCAACGT GACCGACGAC
ACGATTGGCC TGTTCAGTCT GGATGTGTCG GGGCACGGGG TTGCGTCGGC CATGTTGGCC
GCGCGTACAG CCGGGATGCT GTCAGAGGCC TCGCCCGACC AGAACATCGC GATGGAACGG
GGCCCGGATG GGCAGTTCTT TGACCTCCCG CCCGATATCG CCGTTGGCCG TATGAACGAT
CTGCTGCTGA AAGAGGTTCA GACGGATCGC TATTTCACCA TCTGCATCGC GTTTGCTAAC
CTGAAGACTG GCCTCTTGCG GATCGTGCAG GCTGGCCATC CACACCCGAT GGTTCTGCGC
GCGACCGGCC AGGTCGACAT GGTCGGCGAC GGTGGCCCAC CCGTGGGTTT GCTGCCCAAT
ATGCCCTTCA CTTCGTTTGA GCTTCAATTG AACCCCGGCG ACAGGGTGCT GATGTACTCC
GATGGCCTGA CGGAATGCCC CAACGTCCAA GGTGACATGC TGGACGACGA CGGCCTGATC
GACTTGATGA AAAAGAACAA ATCCGAAGAA AACGTGGCGT TTCTGTCGGC ACTGCGGGAC
GGTTTGGTGG ATTTCGCAGG CACGACGGAT TTTCCCGACG ACCTCTCAGC CCTGCTGTTC
TCCTTCCGCG GGGCCCCATA A
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| Protein sequence | MGASLPKVAA GRPAAVDPEP DALTVLVLDD SPAQRNMVCA LLRRWGHTAI STGDPVEALA
RAREPDISLI LCDWMMPEMT GPEFCHRLRS EVTDTYPYVL LLTSNTDRGA VAEGLAAGAD
DFLNKPVRPP ELQARMNAGA RIVAMQQELR AKNGLLETTL DELQLLYDAI DRDLDEARRL
QMASLQDTHR PFKGGDVSLL LEASGHVGGD MVGYFNVTDD TIGLFSLDVS GHGVASAMLA
ARTAGMLSEA SPDQNIAMER GPDGQFFDLP PDIAVGRMND LLLKEVQTDR YFTICIAFAN
LKTGLLRIVQ AGHPHPMVLR ATGQVDMVGD GGPPVGLLPN MPFTSFELQL NPGDRVLMYS
DGLTECPNVQ GDMLDDDGLI DLMKKNKSEE NVAFLSALRD GLVDFAGTTD FPDDLSALLF
SFRGAP
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