| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1702 |
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| Symbol | |
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| ID | 6115943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2114701 |
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| End bp | 2116083 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641633184 |
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| Product | response regulator receiver modulated serine phosphatase |
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| Protein accession | YP_001760082 |
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| Protein GI | 170726056 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGATA GCTTATTTAA ATTTCAAACC GAAAATCTTA ATATTTTGAT CGTTGAAGAT
ACCCAAAGTG AGCGTTGTTT TATCGCCCAA CTATTACAAA ACATGGGACT TCACGTGAAT
AGTTGTAGCT CTGCTGAGCA AGCAATACTT GAGTATGAAA GGCAAGAGGT GGATATCGTG
ATTAGCGACT GGAGAATGCC GGGGATCACT GGGCCTGAGC TTTGTGAACA TTTAAAATCG
CTCCCCTTTC CTCCCTATAT CATATTGTTA ACTTCCAATA ATTTAGCTGA GCATATGATC
CAAGGCATAG AATCCGGTGC AGATGATTTT ATCTCTAAGC CATTTGTGCC TAACGTGCTA
AAGGTCCGCA TCTTAGCCGC AGCACGAATT GTGAAACTTC AACGTAAGTT GACCCATAAG
AATAGTGAGC TTAATACCGC ACTGGCAAAC GAACATGAGT GCCTTAAGCA GATACAAAGT
GACATGAAAA GTGCAGTAAA ACTGCAAAGC TCTCACCTGC CATCATCAAG TCATTTGATC
AATCAGTGGC ACTTAGCCAC TCGATTTAAT CCAGCACAGG AGCTCGCAGG TGATATTTTC
CAATGCATAG AGATAGACAA GACCCACATT GGATTTTACC TACTTGATGT GACTGGACAC
GGTATTGCAG CCTCGATGCA GAGCTTTACT TTAGCTCAAC AGCTTAGCTG TAATAGCTGT
GATTGGGAAA GCTTAGATCC AGCTTTAATA GTCAACAAGC TTAACCAAGA TTTTGAAGAC
CCTGAAAATA AAGGACGATT TGCAACATTA ATACTTGGTA TTGCAAATAG CTTAACTGGT
GAGATTAGAA TCACCGTTGC CGGACACCCC CAACCCATAT TATTAGACGA TACAGGTGCT
AGGTTAATGG AGTTAGATTC AGGGCTTCCC TTGGGAATAG ACAGACAATT TAGCTACCGA
TATAGCAAGT TCACATTAAA AAGCCATCAA CATTTGATGC TTTACTCAGA TGGATTATAT
GAATCAATGC ACCCAAGGTT TGGTGAATTT GGCATCACTC GATTAGTTAA AAGATGTGAT
CAAGCCCATT CACTCTCTCC CGAATCCCTA TTGCATCATC TCAGTCACTC TATAAACCTA
TGGCAGCAAA AAAAACCACA AGATGATATT TCGATGATGT TGCTATCTGC GCCAAGTCTC
TTCAAACAGA GCCCTATGCT AGATAGCACT CCCGTTAAAG AGCTCTACTA TTCGCATGTA
GAAACCGAAG ATCGGACTTT CAAGAATGAG GCAGTTATCA ATGAGGTATT GCCTGTACAC
CCCCTTTCAA AAGCATCAAT AACTTCAGCT TCAGACTGTA TCTCTCGGAG GATATATGAA
TAG
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| Protein sequence | MVDSLFKFQT ENLNILIVED TQSERCFIAQ LLQNMGLHVN SCSSAEQAIL EYERQEVDIV
ISDWRMPGIT GPELCEHLKS LPFPPYIILL TSNNLAEHMI QGIESGADDF ISKPFVPNVL
KVRILAAARI VKLQRKLTHK NSELNTALAN EHECLKQIQS DMKSAVKLQS SHLPSSSHLI
NQWHLATRFN PAQELAGDIF QCIEIDKTHI GFYLLDVTGH GIAASMQSFT LAQQLSCNSC
DWESLDPALI VNKLNQDFED PENKGRFATL ILGIANSLTG EIRITVAGHP QPILLDDTGA
RLMELDSGLP LGIDRQFSYR YSKFTLKSHQ HLMLYSDGLY ESMHPRFGEF GITRLVKRCD
QAHSLSPESL LHHLSHSINL WQQKKPQDDI SMMLLSAPSL FKQSPMLDST PVKELYYSHV
ETEDRTFKNE AVINEVLPVH PLSKASITSA SDCISRRIYE
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