Gene Cagg_2467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2467 
Symbol 
ID7266191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2995769 
End bp2996926 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content53% 
IMG OID643567293 
Productresponse regulator receiver modulated serine phosphatase 
Protein accessionYP_002463775 
Protein GI219849342 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATC AACTAACCGG CCGGATCCTC ATCATCGATG ATAGTGAACA CAATCGCTAT 
TTGTTGACCC GCCAGCTCGA ACGGCGTGGA CACAGCATAG CTACTGCTTC TCATGGTCGC
CAAGGGTTGG AATACGCTCA ACGCGAACCC TTCGATGTCA TTCTGCTCGA TCTGATGATG
CCGGAAATGG ACGGGTTCAC CGTGCTCGAT CAGCTCAAGC GTAATCCCCA GACCCACCAC
ATTCCGGTGA TCGTGATTTC GGCAATTAAT GAAATTGATG ACGTGGTACG TTGTATCGAG
GCAGGCGCCG AAGATTATTT AACCAAGCCC TTCAACCAAA CACTGCTGTA CGCGAAAATT
AATGCCTGCC TCGAACGAAA AAGGCTACGC GATAGCGAAC AAGCGTATCT CAACGCTATT
CGCTACGAAC TAGAGTTGGG CCGGCGGACA CAAGCAGACT TCTTACCCAC CAGCTTACCA
CACCTGACCG GTTGGGAAAT TACGGCTGCG TTTGTGCCGG CGCGGGAAGT GGCCGGTGAT
TTCTACGATG CTTTTCTCTT GCCTGACCAG CGGTTAGTCT GTTTTTTGGG GGATGTGTGT
GATAAAGGGG TCGGCGCAGC ATTGTTTATG GCACTGACCC GCTCACTCTT GCGTGCATTT
ATCGAGCAAG CTGCGACCAA TGGTACCGAT CCGCTACGTG CGGTTGCAAT GACCAATGAG
TATATTGCCC GTCACCATCG CGCCAACCGC ACCTTCTCGA CCATCTTCTG TATTATGTTT
GAGCCTCAGA GTGACCTTGC ACGGTATGTA AACGCCGGTC ATCCAGAGCC GCTCATTATC
AGAGCAGATG GTAGCGTTTC GCACCTCATT ACCACAGGGC CGGCTGTCGG TTGGATCGCA
GATGCCCGTT TTACCATTGA GACAACCACA TTGCGTGCAG GAGACATCCT TTTTGCCTAC
ACCGACGGTG TCACCGAGGC ACGCACACGT AATGGTGAGA TGTTTGGAGA GGGACGACTG
CTCAGCACCA TCACTACAGC CTACAAGCAA ACCCTTCGCC TTGATGTCAT CCAGCAGGCA
GTGATGATGT ATACCGGCCA ACCGCAACCT GTCGATGATC TGACCATGTT GGCGGTATGC
CGGTGTCGTA CCGACTAA
 
Protein sequence
MADQLTGRIL IIDDSEHNRY LLTRQLERRG HSIATASHGR QGLEYAQREP FDVILLDLMM 
PEMDGFTVLD QLKRNPQTHH IPVIVISAIN EIDDVVRCIE AGAEDYLTKP FNQTLLYAKI
NACLERKRLR DSEQAYLNAI RYELELGRRT QADFLPTSLP HLTGWEITAA FVPAREVAGD
FYDAFLLPDQ RLVCFLGDVC DKGVGAALFM ALTRSLLRAF IEQAATNGTD PLRAVAMTNE
YIARHHRANR TFSTIFCIMF EPQSDLARYV NAGHPEPLII RADGSVSHLI TTGPAVGWIA
DARFTIETTT LRAGDILFAY TDGVTEARTR NGEMFGEGRL LSTITTAYKQ TLRLDVIQQA
VMMYTGQPQP VDDLTMLAVC RCRTD