| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1964 |
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| Symbol | |
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| ID | 1183609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2150505 |
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| End bp | 2152211 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393342 |
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| Product | response regulator |
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| Protein accession | NP_791787 |
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| Protein GI | 28869168 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.58831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAGTCGC CTCTGAAGAA GCTGTGCATT CTGATTGCCG ACGACAGCGC CAGTGACCGG
GTGCTGCTTT CGACTATTGT TGCGCGTCAG GGCCACAGAG TGCTGTGTGC TGCCAATGGT
GTCGAGGCGG TAGCGATCTT CATGGCCGAA AGCCCGCAGT TGATTCTGAT GGACGCGATG
ATGCCGGTCA TGGATGGCTT CGAAGCGGCG CGACGGATCA AGGCGCTGAC GGGCGAATCG
CTGGTGCCAA TCATCTTTCT CACCTCGCTG ACCGAAGGTG AAGCGCTGGC ACGCTGTCTG
GACGCCGGCG GCGATGATTT CATGTCCAAG CCTTATAACC CGCTGGTACT GGCTGCCAAG
ATCAATGCGA TGAACCGCCT GCGGGTATTG CACGAAACCG TTCGTCTGCA GCGCGACCAG
ATCAGTAAGC ACCACGAATA CCTGCTCAAT GAGCAGCGGG TTGCGAAGGC CGTATTCGAT
CAGGTGGCGC ACGCCGGATG TCTGGGGGCG GGCAATATCC GTTATCTGCA ATCGCCTTAT
GCGCTGTTCA ACGGTGATCT GATGCTGGCT GCCTACGCCC CGGCCGGGCA CATGCAGGTG
CTGCTCGGCG ATTTCACCGG TCATGGCTTG CCGGCTGCCG TGGGTGCCAT GCCGCTGGCC
GATGTGTTCT ACGGCATGAC CGCCAAGGGC TATGGCCTGA TCGAGATCCT TCGTGAAATG
AATGCCAAGC TCAAGCGCAT TCTGCCGGTC GACATGTTCT GCTGCGCGAC GCTGCTGTGC
ATCAATCTCC CGCAACGACA GGTCGAGGTG TGGAACGGCG GCTTGCCGGA TGGCTATCTG
TTGCGCGGTA CGGACGGCGA GCATGTGCCG CTGGCGTCCA GTCATCTGCC TCTGGGCGTG
CTGAGTGTCG ACGCTTTCGA TGCGCGCACC GAGGTTTACC CGCTGGCACC AGGTGACCGG
ATATTTCTGT TGTCCGATGG CGTGCTCGAC ACCAGCGACA GCAACGACCA GTTGTTCGGC
GTACAGCGCC TGCGGGAGGT TCTGTCTGCC AATCGCGAGC CGCCATTATT GATTCAGGAA
ATCCTCCAGG CGCTTAACGA TTTCGGCGGC AAGGCGCGTG ACGATGTCAG CCTGCTGGAA
ATCAGCGCGG TCGATGAGCC GCTCACCCGT CGGCCGGCAC CCACTTATTC GGACAGCGGC
GCGTCGAGCC CGCTGGACTG GTCGGCCAGC TTCGAGTTTC GGGCTTCGAC TCTCAAACGC
TTCAATCCGC TGCCTTATGT GCTGCAATTG CTTCTGGAAG TTCATGGGTT GCGCAATCAG
GGCGCGGCGT TGCACATGGT GCTCGGTGAG CTGTACAGCA ATGCGCTGGA GCACGGTGTG
CTAGGGCTGG ACTCGGCGCT CAAGCATGAT GCCGCAGGTT TCGCACTGTA TTACCGGCAG
CGTGCGGAGC GTCTGGGCGC ACTTGAGTCC GGATTCATTC GCGTAACCGT GCAGGTCGAG
CCGGTAGGAG AAGGCGGGCG ATTAACCCTC AGTGTCGAAG ACAGCGGCGA CGGATTTGAT
GCAAACAAGG CGCAAATGTT GATACCTGAC AGCGATGAGC TGTATGGTCG CGGACTTCGG
TTGGTGTGCG AGCTCAGTCA CGAGGCCCGT TGGTCCACTG ATGGCAGGAC CGCCTGCGTG
GAATTTTCCT GGGAGGGAGT GGCATAA
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| Protein sequence | MQSPLKKLCI LIADDSASDR VLLSTIVARQ GHRVLCAANG VEAVAIFMAE SPQLILMDAM
MPVMDGFEAA RRIKALTGES LVPIIFLTSL TEGEALARCL DAGGDDFMSK PYNPLVLAAK
INAMNRLRVL HETVRLQRDQ ISKHHEYLLN EQRVAKAVFD QVAHAGCLGA GNIRYLQSPY
ALFNGDLMLA AYAPAGHMQV LLGDFTGHGL PAAVGAMPLA DVFYGMTAKG YGLIEILREM
NAKLKRILPV DMFCCATLLC INLPQRQVEV WNGGLPDGYL LRGTDGEHVP LASSHLPLGV
LSVDAFDART EVYPLAPGDR IFLLSDGVLD TSDSNDQLFG VQRLREVLSA NREPPLLIQE
ILQALNDFGG KARDDVSLLE ISAVDEPLTR RPAPTYSDSG ASSPLDWSAS FEFRASTLKR
FNPLPYVLQL LLEVHGLRNQ GAALHMVLGE LYSNALEHGV LGLDSALKHD AAGFALYYRQ
RAERLGALES GFIRVTVQVE PVGEGGRLTL SVEDSGDGFD ANKAQMLIPD SDELYGRGLR
LVCELSHEAR WSTDGRTACV EFSWEGVA
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