Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1039 |
Symbol | |
ID | 3760561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1115211 |
End bp | 1116914 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637785760 |
Product | response regulator receiver domain-containing protein |
Protein accession | YP_391308 |
Protein GI | 78485383 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCGTA TTTTAGTTGT TGACCCTTCC TATTCTAATC GACTCTATCT TAAACTGACG CTTGAAAGAG CGGGCTATCA AGTCTTTGAC GCCAAAGATG GAAAAGAAGC ACTTAATCAA TTCAAACAAT TTCAACCTCA TTTAGTCATT ACCGAAATTG ACTTGCCGTT GTTATCTGGC GAATCATTAG TGTCAGAAAT TAAATCGCTG ACAGAAGAAA CCTTTTACCC GATTTTTGTC GTCACCAACG TAACCAGCCC GGAATCCATT CAAGAAATTT TAGAGGCAGG TGCTGATGAT TTCTTGCAAA AACCCTATCC TGAAAAACTC TTTCTAGCCA AAGTAGCTTC TTTGCTACGC AATTTGGATT TTTATAATGA TTTAAAAAAC TCTAAAGAAT TGGTGTCTAC TTTGCACTCC AGTCTGGAGT TGGAACATAA ATCAGCCGAA CGTATTTTTG AAAAGTTTGT GCATGGGCCA AGAAAAGAAG TGCCAGGGCT CAAAACGCAT ATTTCTTCAG CGTCGATTTT TAATGGTGAT GTGTTTTTGT CTTCCATTTC TCCGGCTGGA AATGTAGTGA CCTTACTGGG CGATTTTACT GGACATGGCC TCCCTGCATC GATTGGTGCG ATTCCCGTTG CAGAAGTCTT TTATTCCATG GTTCGAAAAG GCCGAACACT TAAAGAAATC GTTTCGGTTA TTAATGAAAA GCTTTTACTG ATCTTGCCGG TACATGTTTT TTTTAGTTGT ACGGTTGTGA AAGTCTTGCC TAAGCATAAA ACAGCTAAAG TGTTGAATGC GGGCATGCAG CCTTTGATTA TGGTTGATGA TAAAACCCGT GAAGTGACGC AGTATCACTC GACCTGTGTG CCTTTGGGGA TTGTTGCTAG CGACATTCTA GGAATAGAGT TGACGGAAGT TAACTTGAAA GGGCATGAGC AATTTATTTT ATATACGGAT GGCGTGGTTG AGGCTATGAA TTGTGATGGC GAGCAGTTCG GTGTGCCCCG CCTAATCGAT GCTCTTCTGA ATACGGCAGA ACTCGATATA ACCCTTTTGG TGGAAGACAG TCAAAACTTT TGTAGTTGTG AGCCATTTAC GGATGATGTC AGCATTATTA AACTGAATAT TGAAGAGATC TTTAAAGCTG AATTCAATGA AATTTCTGAA GTGGTATCTG AAAAAATTCC TGCACCGGCT GACTGGAATC TGTCATATTG TTTGAGTGCC AATGTCTTAA AACAGAATGA CAAGCCGATT GAATCAATCA TAGATGCAAT GATGGGAATC CAGTCGTTAG TGAACTATAA AGAAGACTTT CACATTGTTT TAAGCGAGTT ATTTAATAAC GCGTTGGAGC ATGGTTTATT GCAATTGGAT TCAACCATAA AACAGCAAGA TAATGGTTTT TTTGAGTACG TACAACAAAG AAAACGAGCC TTGAGTGACC TTGAAAGTGG CGAAATTATG ATTCAAATTA AACATACGGC TCTTTCAGAA GAAAAAGGAA AAATGCATTT TATTATTTCT CATAATGGAA AGGGTAAAGT CGACTTAGAA ATGGATCAAC GTATATCGGA CAGCTCTTTC TTTGGCAGAG GGATTAAGAT TGTCCAGTCG CTTTGTAATG AATTTTATTT TAAGAAAGGC GGTGCTCAAG TCGAAGCGGT TTATGAATGG GAGAGCGTTC AATATGCCTC ATAA
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Protein sequence | MTRILVVDPS YSNRLYLKLT LERAGYQVFD AKDGKEALNQ FKQFQPHLVI TEIDLPLLSG ESLVSEIKSL TEETFYPIFV VTNVTSPESI QEILEAGADD FLQKPYPEKL FLAKVASLLR NLDFYNDLKN SKELVSTLHS SLELEHKSAE RIFEKFVHGP RKEVPGLKTH ISSASIFNGD VFLSSISPAG NVVTLLGDFT GHGLPASIGA IPVAEVFYSM VRKGRTLKEI VSVINEKLLL ILPVHVFFSC TVVKVLPKHK TAKVLNAGMQ PLIMVDDKTR EVTQYHSTCV PLGIVASDIL GIELTEVNLK GHEQFILYTD GVVEAMNCDG EQFGVPRLID ALLNTAELDI TLLVEDSQNF CSCEPFTDDV SIIKLNIEEI FKAEFNEISE VVSEKIPAPA DWNLSYCLSA NVLKQNDKPI ESIIDAMMGI QSLVNYKEDF HIVLSELFNN ALEHGLLQLD STIKQQDNGF FEYVQQRKRA LSDLESGEIM IQIKHTALSE EKGKMHFIIS HNGKGKVDLE MDQRISDSSF FGRGIKIVQS LCNEFYFKKG GAQVEAVYEW ESVQYAS
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