Gene Tcr_1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1039 
Symbol 
ID3760561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1115211 
End bp1116914 
Gene Length1704 bp 
Protein Length567 aa 
Translation table11 
GC content39% 
IMG OID637785760 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_391308 
Protein GI78485383 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCGTA TTTTAGTTGT TGACCCTTCC TATTCTAATC GACTCTATCT TAAACTGACG 
CTTGAAAGAG CGGGCTATCA AGTCTTTGAC GCCAAAGATG GAAAAGAAGC ACTTAATCAA
TTCAAACAAT TTCAACCTCA TTTAGTCATT ACCGAAATTG ACTTGCCGTT GTTATCTGGC
GAATCATTAG TGTCAGAAAT TAAATCGCTG ACAGAAGAAA CCTTTTACCC GATTTTTGTC
GTCACCAACG TAACCAGCCC GGAATCCATT CAAGAAATTT TAGAGGCAGG TGCTGATGAT
TTCTTGCAAA AACCCTATCC TGAAAAACTC TTTCTAGCCA AAGTAGCTTC TTTGCTACGC
AATTTGGATT TTTATAATGA TTTAAAAAAC TCTAAAGAAT TGGTGTCTAC TTTGCACTCC
AGTCTGGAGT TGGAACATAA ATCAGCCGAA CGTATTTTTG AAAAGTTTGT GCATGGGCCA
AGAAAAGAAG TGCCAGGGCT CAAAACGCAT ATTTCTTCAG CGTCGATTTT TAATGGTGAT
GTGTTTTTGT CTTCCATTTC TCCGGCTGGA AATGTAGTGA CCTTACTGGG CGATTTTACT
GGACATGGCC TCCCTGCATC GATTGGTGCG ATTCCCGTTG CAGAAGTCTT TTATTCCATG
GTTCGAAAAG GCCGAACACT TAAAGAAATC GTTTCGGTTA TTAATGAAAA GCTTTTACTG
ATCTTGCCGG TACATGTTTT TTTTAGTTGT ACGGTTGTGA AAGTCTTGCC TAAGCATAAA
ACAGCTAAAG TGTTGAATGC GGGCATGCAG CCTTTGATTA TGGTTGATGA TAAAACCCGT
GAAGTGACGC AGTATCACTC GACCTGTGTG CCTTTGGGGA TTGTTGCTAG CGACATTCTA
GGAATAGAGT TGACGGAAGT TAACTTGAAA GGGCATGAGC AATTTATTTT ATATACGGAT
GGCGTGGTTG AGGCTATGAA TTGTGATGGC GAGCAGTTCG GTGTGCCCCG CCTAATCGAT
GCTCTTCTGA ATACGGCAGA ACTCGATATA ACCCTTTTGG TGGAAGACAG TCAAAACTTT
TGTAGTTGTG AGCCATTTAC GGATGATGTC AGCATTATTA AACTGAATAT TGAAGAGATC
TTTAAAGCTG AATTCAATGA AATTTCTGAA GTGGTATCTG AAAAAATTCC TGCACCGGCT
GACTGGAATC TGTCATATTG TTTGAGTGCC AATGTCTTAA AACAGAATGA CAAGCCGATT
GAATCAATCA TAGATGCAAT GATGGGAATC CAGTCGTTAG TGAACTATAA AGAAGACTTT
CACATTGTTT TAAGCGAGTT ATTTAATAAC GCGTTGGAGC ATGGTTTATT GCAATTGGAT
TCAACCATAA AACAGCAAGA TAATGGTTTT TTTGAGTACG TACAACAAAG AAAACGAGCC
TTGAGTGACC TTGAAAGTGG CGAAATTATG ATTCAAATTA AACATACGGC TCTTTCAGAA
GAAAAAGGAA AAATGCATTT TATTATTTCT CATAATGGAA AGGGTAAAGT CGACTTAGAA
ATGGATCAAC GTATATCGGA CAGCTCTTTC TTTGGCAGAG GGATTAAGAT TGTCCAGTCG
CTTTGTAATG AATTTTATTT TAAGAAAGGC GGTGCTCAAG TCGAAGCGGT TTATGAATGG
GAGAGCGTTC AATATGCCTC ATAA
 
Protein sequence
MTRILVVDPS YSNRLYLKLT LERAGYQVFD AKDGKEALNQ FKQFQPHLVI TEIDLPLLSG 
ESLVSEIKSL TEETFYPIFV VTNVTSPESI QEILEAGADD FLQKPYPEKL FLAKVASLLR
NLDFYNDLKN SKELVSTLHS SLELEHKSAE RIFEKFVHGP RKEVPGLKTH ISSASIFNGD
VFLSSISPAG NVVTLLGDFT GHGLPASIGA IPVAEVFYSM VRKGRTLKEI VSVINEKLLL
ILPVHVFFSC TVVKVLPKHK TAKVLNAGMQ PLIMVDDKTR EVTQYHSTCV PLGIVASDIL
GIELTEVNLK GHEQFILYTD GVVEAMNCDG EQFGVPRLID ALLNTAELDI TLLVEDSQNF
CSCEPFTDDV SIIKLNIEEI FKAEFNEISE VVSEKIPAPA DWNLSYCLSA NVLKQNDKPI
ESIIDAMMGI QSLVNYKEDF HIVLSELFNN ALEHGLLQLD STIKQQDNGF FEYVQQRKRA
LSDLESGEIM IQIKHTALSE EKGKMHFIIS HNGKGKVDLE MDQRISDSSF FGRGIKIVQS
LCNEFYFKKG GAQVEAVYEW ESVQYAS