Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2956 |
Symbol | |
ID | 4482030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 3670190 |
End bp | 3671287 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639723703 |
Product | response regulator receiver protein |
Protein accession | YP_866853 |
Protein GI | 117926236 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAAA TTTTAGTGGT GGACGATGAC CCCATGAGCC TCATGCACTT GGAGTATTTC CTTGCCCAGC AGGGCCATGA GGTGGTAACC GCCGCTGACG GCCACCAAGG CGTAGCGGCC TTTGAGCAGA TCCAACCCCA GTTGGTACTC ATGGATGTGA TGATGCCCAA CATGGATGGC TACACCGCGA CCGGCCATAT TAAAAGCAGC AGCGCCGACC GCAACCAAGT CCCTGTGCTG TTTTTAACCG GCATCGCCGA TCAAACCATG CTGGCCCACT GCTTGGCTTG TGGGGGAGAT GATTTTATCA CCAAGCCCTT TGATAACATT ATTTTAAAAG CACGCATTGA TGCTTGGTTA CGCCGCATTG AGTTGGACAA TCGGGTGAAA GCGGATCGCC TTAAAGTGGA AGGGGTCTTA TTACGCATGC GTGAGGATGA TCGTTTTGAT GGCCGCAACC TACGCTATCT TATGACCCCC CTTGAAAAGA CCAATGGGGA CATCATCCTC TCAGCCCGCA CGCCCGACGG CACCCAGCAC ACCATGGTGG GGGATTTTAC CGGTCACGGC CTCCCGGCGG CCATCGCGGG CCCGCTGCTT TCTGAAATTT TTTACCACGA CGTCGCCGAA GGCGCACCCG GTCAACACAT ACTGACACAT ATCAATCAAA CGTTACAAAA AAAGCTTCCA ACCGCCATGT TCCTGTGCGC TACCTACCTT ACCATCGGGC CGGACCGTAA CAGCGTACAG CTGTGGAACT GCGGCATGCC GGATCTGCTG ATATTTGATC CAGATCTGAC GGTACACCGT CTCACCTCAA CCCATATGCC CTTGGGCATT ATGCCGCAGC CGTTTAACCA GGATTCGGGA CGCATCCACC CCCTTCAGCC GAGCCAACGC CTCGTTGTCT ATTCCGACGG CATTGTCGAA ACCCTAAACC AACACTTTGA AATGTATGGA GTTGAGCGCT TGATCGCGCA ATGGGTACAG ATACACCAAC AGCATGGGGA TTTAACGGAG ATTTTAACCG ATTTAAACCG GTTTCGTGGC ACGCAACAAC AGACGGATGA TATCACTTTG ATGGAGCTTA CACCGTGA
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Protein sequence | MAKILVVDDD PMSLMHLEYF LAQQGHEVVT AADGHQGVAA FEQIQPQLVL MDVMMPNMDG YTATGHIKSS SADRNQVPVL FLTGIADQTM LAHCLACGGD DFITKPFDNI ILKARIDAWL RRIELDNRVK ADRLKVEGVL LRMREDDRFD GRNLRYLMTP LEKTNGDIIL SARTPDGTQH TMVGDFTGHG LPAAIAGPLL SEIFYHDVAE GAPGQHILTH INQTLQKKLP TAMFLCATYL TIGPDRNSVQ LWNCGMPDLL IFDPDLTVHR LTSTHMPLGI MPQPFNQDSG RIHPLQPSQR LVVYSDGIVE TLNQHFEMYG VERLIAQWVQ IHQQHGDLTE ILTDLNRFRG TQQQTDDITL MELTP
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