| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0347 |
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| Symbol | |
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| ID | 3569820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 379624 |
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| End bp | 381165 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637678789 |
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| Product | PAS |
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| Protein accession | YP_283576 |
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| Protein GI | 71905989 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000072068 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGATTCCAA TAATGAACAA AATGAAGGTA CTGGCGGTTG ATGACAACCG CACCAACCTG
CACATTCTCC AGGTCTTCCT GAAGAAGCTT GGGCATGAAG TCGTTCTTGC TGAGAACGGC
GAGGAGGCGG TACGTCGATT TGAGACCGAC GCTCCGGACC TGGTTCTCCT CGACATCATG
ATGCCGGTTA TGGATGGCTT TGAAGCAGCT CGTCGTATCA AGGCCATGAC CCGTGATCGC
TGGACGCCAG TCATCTTCCT TTCCGCCCTG AATCGCGACG AAAACCTCGT TGAAGGGTTG
GATGCAGGCG CCGACGACTA CCTTACCAAG CCGATCAATT TTGTCGTTCT GGAAGCCAAG
TTGCGTTCGA TGCAACGTTC GCTGACCATG CAGCAGCAGT CTATCGATTC GCTGCGCCGG
GTTCAGGCAA TTTCCGACAA CGTGCTGGAT GCCATCGTTA CAACCAACGA AGAAGGAATG
ATCGTCTCGG TAAATCAATC CACCGAACGT ATTTTTGGTT GGTCCACGGC AGAGCTGCTT
GGACAGAATG CCTCGCTACT AATGCCAGTC CCGGCGAGCG CATCGGGTGA CATAATGCTC
AGCCCGGGTG ACGCGGCAAG GCCCTTGCCG GGGGCTGGAC AAGAACAGGA AATAAATGCC
CGGCACAAGG ATGGGCATAT ATTCCCGGCA ACCATCTCAA TCAGTCAGGT CGAGCTCGAC
AATCAACGCA TGATCATCAG TGTGATCCGC GACATTTCCG AGCGGAAAGA AACCGAACAA
AAGCTGCGCG AAAACGCCCA GCAGCTGCAG GACTACTACG ACCAAACCCA GACCGAACAA
CAACTTGCCC TGCGCCTGAT GGAAAAGCAA CTCCACCGCA GCGGTCTTCG CGACAAACGC
CTCCGCTACA AAGTCATTCC AGCCGAACAT TTCAGCGGTG ACATTGTCGC CGCCTCCCGC
TCCCCGGATG GACTCTTGTA CGCGTTACTG GCCGATGCAA CCGGCCATGG ATTGACCGCC
GCGATCAGTG TCCTGCCGGT ATTGGCCCTG TTTTATCGGA TGACCAAACT CAACCGGTCA
ATCCAGGAAA TAGTGCTGGA ATTAAATCAA CAACTAAAGG AATCCATGCC GGTCGGGCGT
TTTGTCGCCG TGACGCTGGT CTGCCTAGAT GAAAAGAACA GAAAAGGCGA AATATGGGTC
GGCGGTACGC CCGAAGCCTT CCTTTTTGAT CGCTGGGGGC GGGTTGCCAG CACATTCCCT
TCCGACAACC TGCCGCTCGG CATCGTTGGC AGCAATGAAC TAGGCGGCCA CCCACGACTA
TTTTCGTGGG AACCGGAAAG CCAACTCGCG CTATGCTCCG ATGGCCTTCT GGAAGCGACC
GACACCGAAG GTAAACAGTT TGGAAATTCG GGCCTGATCA ACTCCGCATC AAACACCTCG
CCAAGCGACC GCTTTGCCAA GATAGAAACT GCGCTGAAAG AGCATCAGAA TGGCTGCGCC
GCCAGCGACG ATGTATCACT AATGCTGATC GACTGCCCTT AA
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| Protein sequence | MIPIMNKMKV LAVDDNRTNL HILQVFLKKL GHEVVLAENG EEAVRRFETD APDLVLLDIM
MPVMDGFEAA RRIKAMTRDR WTPVIFLSAL NRDENLVEGL DAGADDYLTK PINFVVLEAK
LRSMQRSLTM QQQSIDSLRR VQAISDNVLD AIVTTNEEGM IVSVNQSTER IFGWSTAELL
GQNASLLMPV PASASGDIML SPGDAARPLP GAGQEQEINA RHKDGHIFPA TISISQVELD
NQRMIISVIR DISERKETEQ KLRENAQQLQ DYYDQTQTEQ QLALRLMEKQ LHRSGLRDKR
LRYKVIPAEH FSGDIVAASR SPDGLLYALL ADATGHGLTA AISVLPVLAL FYRMTKLNRS
IQEIVLELNQ QLKESMPVGR FVAVTLVCLD EKNRKGEIWV GGTPEAFLFD RWGRVASTFP
SDNLPLGIVG SNELGGHPRL FSWEPESQLA LCSDGLLEAT DTEGKQFGNS GLINSASNTS
PSDRFAKIET ALKEHQNGCA ASDDVSLMLI DCP
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