153 homologs were found in PanDaTox collection
for query gene Mrub_1737 on replicon NC_013946
Organism: Meiothermus ruber DSM 1279



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013946  Mrub_1737  hypothetical protein  100 
 
 
225 aa  456  1e-127  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_1833  protein of unknown function DUF752  64.09 
 
 
229 aa  284  1.0000000000000001e-75  Meiothermus silvanus DSM 9946  Bacteria  normal  0.253186  normal 
 
 
-
 
NC_008025  Dgeo_1456  hypothetical protein  50.73 
 
 
225 aa  180  2e-44  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.439461  normal  0.0456624 
 
 
-
 
NC_002950  PG2146  hypothetical protein  32.37 
 
 
251 aa  106  3e-22  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_013162  Coch_1602  protein of unknown function DUF752  29.03 
 
 
220 aa  103  3e-21  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1538  5-methylaminomethyl-2-thiouridine methyltransferase  37.44 
 
 
672 aa  97.4  1e-19  Ralstonia pickettii 12D  Bacteria  normal  normal  0.0998844 
 
 
-
 
NC_007347  Reut_A1378  5-methylaminomethyl-2-thiouridine methyltransferase  36.05 
 
 
668 aa  96.3  3e-19  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1709  5-methylaminomethyl-2-thiouridine methyltransferase  37.25 
 
 
657 aa  94.4  1e-18  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0318232 
 
 
-
 
NC_010622  Bphy_3066  5-methylaminomethyl-2-thiouridine methyltransferase  36.15 
 
 
655 aa  93.6  2e-18  Burkholderia phymatum STM815  Bacteria  normal  normal  0.16811 
 
 
-
 
NC_007973  Rmet_1887  5-methylaminomethyl-2-thiouridine methyltransferase  34.89 
 
 
672 aa  93.6  2e-18  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_1796  hypothetical protein  38.05 
 
 
639 aa  90.9  1e-17  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3099  hypothetical protein  30.63 
 
 
230 aa  89.7  3e-17  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0626942 
 
 
-
 
NC_014230  CA2559_07050  hypothetical protein  27.07 
 
 
226 aa  89.7  3e-17  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_1926  tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC  38.05 
 
 
639 aa  89.4  4e-17  Acidovorax ebreus TPSY  Bacteria  normal  0.218262  n/a   
 
 
-
 
NC_008752  Aave_3048  hypothetical protein  39.34 
 
 
635 aa  89.4  4e-17  Acidovorax citrulli AAC00-1  Bacteria  normal  0.115559  normal  0.0258128 
 
 
-
 
NC_008576  Mmc1_2377  hypothetical protein  35.59 
 
 
667 aa  89  6e-17  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.954774 
 
 
-
 
NC_013061  Phep_1235  protein of unknown function DUF752  30.19 
 
 
226 aa  88.6  7e-17  Pedobacter heparinus DSM 2366  Bacteria  normal  0.887893  normal 
 
 
-
 
NC_010682  Rpic_1871  5-methylaminomethyl-2-thiouridine methyltransferase  35.24 
 
 
672 aa  88.2  8e-17  Ralstonia pickettii 12J  Bacteria  normal  normal  0.0302238 
 
 
-
 
NC_007651  BTH_I0003  5-methylaminomethyl-2-thiouridine methyltransferase  33.33 
 
 
657 aa  87  2e-16  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3321  hypothetical protein  28.63 
 
 
257 aa  85.9  4e-16  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3653  hypothetical protein  33.74 
 
 
249 aa  85.9  5e-16  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2424  hypothetical protein  34.4 
 
 
637 aa  84.3  0.000000000000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0067  5-methylaminomethyl-2-thiouridine methyltransferase  34.78 
 
 
657 aa  84.3  0.000000000000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A1927  hypothetical protein  31.75 
 
 
617 aa  84  0.000000000000002  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.224364  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3396  5-methylaminomethyl-2-thiouridine methyltransferase  33.77 
 
 
708 aa  84  0.000000000000002  Burkholderia mallei SAVP1  Bacteria  normal  0.145892  n/a   
 
 
-
 
NC_009074  BURPS668_0003  5-methylaminomethyl-2-thiouridine methyltransferase  33.77 
 
 
708 aa  83.6  0.000000000000002  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2914  5-methylaminomethyl-2-thiouridine methyltransferase  32.48 
 
 
660 aa  83.2  0.000000000000003  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0217  5-methylaminomethyl-2-thiouridine methyltransferase  32.48 
 
 
660 aa  83.2  0.000000000000003  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1964  hypothetical protein  35.5 
 
 
653 aa  83.2  0.000000000000003  Methylibium petroleiphilum PM1  Bacteria  normal  0.117707  normal 
 
 
-
 
NC_008836  BMA10229_A1628  5-methylaminomethyl-2-thiouridine methyltransferase  32.48 
 
 
711 aa  82.8  0.000000000000004  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0003  5-methylaminomethyl-2-thiouridine methyltransferase  32.48 
 
 
711 aa  82.8  0.000000000000004  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2973  5-methylaminomethyl-2-thiouridine methyltransferase  32.48 
 
 
711 aa  82.8  0.000000000000004  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0757  protein of unknown function DUF752  27.31 
 
 
500 aa  82.4  0.000000000000005  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_0140  hypothetical protein  34.88 
 
 
218 aa  82.4  0.000000000000006  Jannaschia sp. CCS1  Bacteria  normal  0.946459  normal 
 
 
-
 
NC_011083  SeHA_C2621  5-methylaminomethyl-2-thiouridine methyltransferase  31.54 
 
 
666 aa  81.6  0.000000000000008  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  0.00000350397 
 
 
-
 
NC_009441  Fjoh_4769  hypothetical protein  25.59 
 
 
221 aa  81.3  0.00000000000001  Flavobacterium johnsoniae UW101  Bacteria  normal  0.497303  n/a   
 
 
-
 
NC_010506  Swoo_4256  hypothetical protein  28.7 
 
 
227 aa  80.9  0.00000000000002  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00000473463  hitchhiker  0.0000809329 
 
 
-
 
NC_011662  Tmz1t_1956  5-methylaminomethyl-2-thiouridine methyltransferase  34.47 
 
 
644 aa  80.5  0.00000000000002  Thauera sp. MZ1T  Bacteria  normal  0.243551  n/a   
 
 
-
 
NC_008044  TM1040_0147  hypothetical protein  32.84 
 
 
227 aa  80.5  0.00000000000002  Ruegeria sp. TM1040  Bacteria  hitchhiker  0.00930427  normal 
 
 
-
 
NC_008255  CHU_0640  hypothetical protein  27.1 
 
 
227 aa  80.9  0.00000000000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  hitchhiker  0.00000640329  normal  0.493062 
 
 
-
 
NC_007413  Ava_1778  hypothetical protein  27.73 
 
 
303 aa  79.7  0.00000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0773906  normal  0.904742 
 
 
-
 
NC_007963  Csal_0704  hypothetical protein  31.36 
 
 
699 aa  80.1  0.00000000000003  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B2519  5-methylaminomethyl-2-thiouridine methyltransferase  34.39 
 
 
666 aa  79.7  0.00000000000003  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_2336  hypothetical protein  33.66 
 
 
218 aa  79.7  0.00000000000003  Paracoccus denitrificans PD1222  Bacteria  normal  0.0305292  normal 
 
 
-
 
NC_011080  SNSL254_A2568  5-methylaminomethyl-2-thiouridine methyltransferase  31.12 
 
 
666 aa  80.1  0.00000000000003  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.580805  normal 
 
 
-
 
NC_011205  SeD_A2732  5-methylaminomethyl-2-thiouridine methyltransferase  34.39 
 
 
666 aa  79.3  0.00000000000004  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_2539  hypothetical protein  38.18 
 
 
266 aa  79  0.00000000000006  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0656342  normal 
 
 
-
 
NC_007948  Bpro_2343  hypothetical protein  35 
 
 
637 aa  78.2  0.00000000000009  Polaromonas sp. JS666  Bacteria  normal  0.955559  normal 
 
 
-
 
NC_007493  RSP_0879  hypothetical protein  38.18 
 
 
266 aa  77.8  0.0000000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2608  5-methylaminomethyl-2-thiouridine methyltransferase  34.74 
 
 
666 aa  78.2  0.0000000000001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_1941  hypothetical protein  28.83 
 
 
298 aa  77.4  0.0000000000002  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_0142  hypothetical protein  37.35 
 
 
242 aa  77.4  0.0000000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4644  tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC  33.65 
 
 
645 aa  77  0.0000000000002  Delftia acidovorans SPH-1  Bacteria  normal  0.683342  hitchhiker  0.0000257745 
 
 
-
 
NC_007298  Daro_2850  5-methylaminomethyl-2-thiouridine methyltransferase  33.97 
 
 
644 aa  76.3  0.0000000000003  Dechloromonas aromatica RCB  Bacteria  normal  0.413253  normal  0.437245 
 
 
-
 
NC_007947  Mfla_1390  hypothetical protein  31.98 
 
 
622 aa  76.3  0.0000000000004  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.909333 
 
 
-
 
NC_011353  ECH74115_3465  5-methylaminomethyl-2-thiouridine methyltransferase  31.4 
 
 
668 aa  75.9  0.0000000000005  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_1458  5-methylaminomethyl-2-thiouridine methyltransferase  30.28 
 
 
675 aa  75.9  0.0000000000005  Pectobacterium wasabiae WPP163  Bacteria  normal  0.622829  n/a   
 
 
-
 
NC_009952  Dshi_0152  protein of unknown function DUF752  31.86 
 
 
230 aa  75.9  0.0000000000005  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_1170  hypothetical protein  29.86 
 
 
631 aa  75.5  0.0000000000007  Marinobacter aquaeolei VT8  Bacteria  normal  0.285143  n/a   
 
 
-
 
NC_009801  EcE24377A_2619  5-methylaminomethyl-2-thiouridine methyltransferase  33.33 
 
 
668 aa  75.5  0.0000000000007  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_02249  hypothetical protein  32.52 
 
 
668 aa  75.1  0.0000000000008  Escherichia coli BL21(DE3)  Bacteria  normal  0.425785  n/a   
 
 
-
 
NC_012892  B21_02209  hypothetical protein  32.52 
 
 
668 aa  75.1  0.0000000000008  Escherichia coli BL21  Bacteria  normal  0.334228  n/a   
 
 
-
 
NC_013037  Dfer_3871  protein of unknown function DUF752  31.13 
 
 
226 aa  75.1  0.0000000000008  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.418241  normal 
 
 
-
 
CP001637  EcDH1_1332  tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC  33.33 
 
 
668 aa  75.1  0.0000000000009  Escherichia coli DH1  Bacteria  normal  0.602375  n/a   
 
 
-
 
NC_010658  SbBS512_E2702  5-methylaminomethyl-2-thiouridine methyltransferase  33.33 
 
 
668 aa  75.1  0.0000000000009  Shigella boydii CDC 3083-94  Bacteria  normal  0.673186  n/a   
 
 
-
 
NC_010468  EcolC_1328  5-methylaminomethyl-2-thiouridine methyltransferase  33.33 
 
 
668 aa  74.3  0.000000000001  Escherichia coli ATCC 8739  Bacteria  normal  0.831924  normal 
 
 
-
 
NC_009800  EcHS_A2475  5-methylaminomethyl-2-thiouridine methyltransferase  33.33 
 
 
668 aa  74.3  0.000000000001  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_2983  tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC  30.36 
 
 
620 aa  73.9  0.000000000002  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3401  hypothetical protein  26.17 
 
 
674 aa  73.6  0.000000000003  Marinomonas sp. MWYL1  Bacteria  normal  0.473665  normal 
 
 
-
 
NC_013132  Cpin_3563  protein of unknown function DUF752  27.95 
 
 
223 aa  72.8  0.000000000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0158975  normal  0.127143 
 
 
-
 
NC_011989  Avi_3359  hypothetical protein  30.48 
 
 
219 aa  72.8  0.000000000004  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_0866  tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC  34.08 
 
 
601 aa  72.8  0.000000000004  Caulobacter sp. K31  Bacteria  normal  normal  0.205507 
 
 
-
 
NC_012880  Dd703_2586  5-methylaminomethyl-2-thiouridine methyltransferase  31.31 
 
 
675 aa  72  0.000000000007  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A4505  5-methylaminomethyl-2-thiouridine methyltransferase  30.63 
 
 
656 aa  71.6  0.000000000008  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3742  5-methylaminomethyl-2-thiouridine methyltransferase  29.79 
 
 
665 aa  71.6  0.000000000009  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  decreased coverage  0.0063824 
 
 
-
 
NC_010498  EcSMS35_2481  5-methylaminomethyl-2-thiouridine methyltransferase  30.99 
 
 
668 aa  71.6  0.000000000009  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_3808  hypothetical protein  27.86 
 
 
682 aa  70.9  0.00000000001  Colwellia psychrerythraea 34H  Bacteria  normal  0.424966  n/a   
 
 
-
 
NC_009436  Ent638_2872  5-methylaminomethyl-2-thiouridine methyltransferase  30.58 
 
 
666 aa  71.2  0.00000000001  Enterobacter sp. 638  Bacteria  normal  0.715577  normal  0.0703666 
 
 
-
 
NC_009708  YpsIP31758_1410  5-methylaminomethyl-2-thiouridine methyltransferase  30.4 
 
 
689 aa  71.2  0.00000000001  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.000000203784  n/a   
 
 
-
 
NC_010159  YpAngola_A0372  5-methylaminomethyl-2-thiouridine methyltransferase  30.4 
 
 
689 aa  71.2  0.00000000001  Yersinia pestis Angola  Bacteria  hitchhiker  0.000353518  normal 
 
 
-
 
NC_010465  YPK_1519  5-methylaminomethyl-2-thiouridine methyltransferase  30.4 
 
 
689 aa  71.2  0.00000000001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0252518  n/a   
 
 
-
 
NC_011901  Tgr7_1861  tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC  34.52 
 
 
661 aa  70.5  0.00000000002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_0840  protein of unknown function DUF752  26.32 
 
 
289 aa  70.5  0.00000000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_1076  protein of unknown function DUF752  31.05 
 
 
619 aa  70.1  0.00000000003  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.506712  normal 
 
 
-
 
NC_009620  Smed_4486  hypothetical protein  29.19 
 
 
241 aa  70.1  0.00000000003  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009714  CHAB381_1277  5-methylaminomethyl-2-thiouridine methyltransferase  30.06 
 
 
667 aa  70.1  0.00000000003  Campylobacter hominis ATCC BAA-381  Bacteria  normal  0.0226023  n/a   
 
 
-
 
NC_012917  PC1_2806  5-methylaminomethyl-2-thiouridine methyltransferase  29.24 
 
 
675 aa  69.7  0.00000000004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.641074  n/a   
 
 
-
 
NC_009457  VC0395_A1694  5-methylaminomethyl-2-thiouridine methyltransferase  25.86 
 
 
674 aa  69.7  0.00000000004  Vibrio cholerae O395  Bacteria  hitchhiker  0.00252388  n/a   
 
 
-
 
NC_012912  Dd1591_1358  5-methylaminomethyl-2-thiouridine methyltransferase  30.92 
 
 
672 aa  69.7  0.00000000004  Dickeya zeae Ech1591  Bacteria  normal  0.0608182  n/a   
 
 
-
 
NC_009832  Spro_3369  5-methylaminomethyl-2-thiouridine methyltransferase  31.72 
 
 
673 aa  69.3  0.00000000005  Serratia proteamaculans 568  Bacteria  decreased coverage  0.00235092  normal 
 
 
-
 
NC_008819  NATL1_06691  hypothetical protein  26.27 
 
 
298 aa  68.9  0.00000000006  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.194908  normal 
 
 
-
 
NC_009707  JJD26997_0457  5-methylaminomethyl-2-thiouridine methyltransferase  27.75 
 
 
613 aa  68.9  0.00000000006  Campylobacter jejuni subsp. doylei 269.97  Bacteria  unclonable  0.000000000895922  n/a   
 
 
-
 
NC_013422  Hneap_0743  tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC  33.33 
 
 
668 aa  68.6  0.00000000007  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_0811  protein of unknown function DUF752  26.32 
 
 
289 aa  68.6  0.00000000007  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011884  Cyan7425_3463  protein of unknown function DUF752  26.82 
 
 
296 aa  68.2  0.0000000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.0679006 
 
 
-
 
NC_010681  Bphyt_3932  5-methylaminomethyl-2-thiouridine methyltransferase  31.78 
 
 
656 aa  67.8  0.0000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1343  5-methylaminomethyl-2-thiouridine methyltransferase  29.81 
 
 
654 aa  67.8  0.0000000001  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1359  5-methylaminomethyl-2-thiouridine methyltransferase  27.57 
 
 
657 aa  67  0.0000000002  Pseudomonas putida W619  Bacteria  normal  0.490609  normal  0.307096 
 
 
-
 
NC_008228  Patl_3384  hypothetical protein  29.02 
 
 
705 aa  67.4  0.0000000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1284  5-methylaminomethyl-2-thiouridine methyltransferase  27.75 
 
 
613 aa  67  0.0000000002  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  hitchhiker  0.000566158  n/a   
 
 
-
 
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