Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A2608 |
Symbol | mnmC |
ID | 6515458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 2492703 |
End bp | 2494703 |
Gene Length | 2001 bp |
Protein Length | 666 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642747657 |
Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
Protein accession | YP_002115449 |
Protein GI | 194735009 |
COG category | [E] Amino acid transport and metabolism [S] Function unknown |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) [COG4121] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACAAT ACGCCATACA ACCCGCCACA CTCGAATTTA ACGCTGAGGG TACACCTGTT TCCCGAGATT TTGATGATGT CTATTTTTCT AATGACAATG GACTCGAAGA GACACGCTAC GTTTTTCTTG GCGGCAATCG TCTTGCGGAG CGATTTCCCG TACATTCACA TCCATTATTT ATAGTCGCGG AAAGCGGTTT TGGCACCGGA CTCAACTTCC TGACGCTGTG GCAGGCGTTT GACGGCTTTC GTTCTGAGCA TCCACAGGCG ACGCTGCAAA GGTTACATTT CATCAGTTTT GAGAAATTCC CGTTAACGCG CGACGATCTG GCGCTGGCGC ACCAATACTG GCCGGAGCTC GCGCCCTGGG CAGAGCAGCT GCAGGCGCAA TGGCCGCTGC CGCTCCCGGG GTGCCACCGC CTATTGCTGG ATCGGGGCCG GGTGACGCTG GATTTGTGGT TTGGCGATAT TAATGAACTG ACCGACCAAC TGGACGCCAC GCTGAATCAA ACAGTCGACG CCTGGTTCCT CGACGGTTTT GCCCCGGCGA AAAATCCGGA TATGTGGACG CCAAACCTGT TTAACGCGAT GGCGCGGCTG GCGCGGCCCG GCGCAACGCT GGCGACGTTT ACCTCGGCGG GCTTCGTTCG TCGGGGATTA CAGGAAGCCG GTTTTACCAT GCAAAAACGC AAAGGCTTCG GACGTAAACG CGAGATGCTT TGCGGAGTGA TGGAACAACA CCTCATGCCG ACCCTTTCCG CGCCCTGGTT TTACCGCAGC GGAAGCGAAA AACGTGAAAC GGCGATCATT GGCGGCGGCA TCGCCAGCGC GCTGTTATCA CTGGCGTTAC TGCGTCGCGG CTGGCAGGTG ACGCTCTATT GCGCAGATGA TCAGCCCGCC CAGGGCGCTT CCGGTAATAG ACAGGGCGCG CTTTATCCGC TCCTTAGCAA ACATGACGCC GCCATTAATC GCTTTTTCCC GACCGCATTC ACCTTTGCCC GTCGCCTGTA TGATGCCCTG CCCGTCTCTT TTGATCATGA CTGGTGCGGC GTGACGCAGC TCGGATGGGA TGAGAAAAGC CAGCAGAAAA TTGCCCAGAT GCTGTCCCTG GCGCTGCCCG CCGGACTGGC CTCGGCGCTC AATGCCGAAG AGGCGGAACA GGCGGTTGGC GTGACGACAC GCTGCGGAGG AATTACCTAT CCGGCAGGCG GCTGGCTGTG CCCGGAACAA TTAACTCGCG CAGTCATCGC ACTGGCGACT GAACAGGGTT TACAAACGCG CTTTCGCCAT ACGCTCACGT CGCTCGTTGC GCAGGAGTCG CGCTGGCAAC TGCGCTTTAC GTCAGGTGAA ACCGTCAGCC ATGAGACCGT CGTCCTGGTG AACGGCCATC AGATTAACCG TTTTGATCAG ACCCAGCCGC TGCCGGTGTA TGCCGTCGGG GGGCAGGTCA GCCATATTCC CACCACCCCC GCTCTCTCGG CGTTGCGTCA GGTGTTATGC TACGACGGCT ATCTGACGCC GCAAAATCCG CATAATCAGC AGCACTGTAT TGGTGCCAGC TATCACCGGG GCGACGAAAG CACCGTCTGG CGCGAAGAAG ATCAGCGTCA GAACCGACAG CGTCTGCTTG ACTGTTTTCC GGATGCGAAC TGGGCCACAG AGGTTGACGT TAGCGGCAAC AGCGCCCGTT GCGGCGTGCG TTGCGCCACC CGCGACCATC TGCCGATGGT GGGCAATGTC CCGGATTACC ATGCCACGCT GACGCATTAC GCCGATTTAG CCGATAATAA AACGTCGGCG GCGCCTGCAC CTGTGTATCC GGGTTTATTT ATGCTCGGCG CGCTGGGATC GCGCGGTTTG TGCTCAGCGC CATTATGCGC AGAAATTCTG GCGGCGCAGA TGAGTAACGA GCCGATTCCA CTGGATGCCA GTACGCTGGC GGCGTTAAAT CCGAATCGGT TATGGGTGAG AAAGTTATTG AAGGGAAAAG CGGTGAAGTA A
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Protein sequence | MKQYAIQPAT LEFNAEGTPV SRDFDDVYFS NDNGLEETRY VFLGGNRLAE RFPVHSHPLF IVAESGFGTG LNFLTLWQAF DGFRSEHPQA TLQRLHFISF EKFPLTRDDL ALAHQYWPEL APWAEQLQAQ WPLPLPGCHR LLLDRGRVTL DLWFGDINEL TDQLDATLNQ TVDAWFLDGF APAKNPDMWT PNLFNAMARL ARPGATLATF TSAGFVRRGL QEAGFTMQKR KGFGRKREML CGVMEQHLMP TLSAPWFYRS GSEKRETAII GGGIASALLS LALLRRGWQV TLYCADDQPA QGASGNRQGA LYPLLSKHDA AINRFFPTAF TFARRLYDAL PVSFDHDWCG VTQLGWDEKS QQKIAQMLSL ALPAGLASAL NAEEAEQAVG VTTRCGGITY PAGGWLCPEQ LTRAVIALAT EQGLQTRFRH TLTSLVAQES RWQLRFTSGE TVSHETVVLV NGHQINRFDQ TQPLPVYAVG GQVSHIPTTP ALSALRQVLC YDGYLTPQNP HNQQHCIGAS YHRGDESTVW REEDQRQNRQ RLLDCFPDAN WATEVDVSGN SARCGVRCAT RDHLPMVGNV PDYHATLTHY ADLADNKTSA APAPVYPGLF MLGALGSRGL CSAPLCAEIL AAQMSNEPIP LDASTLAALN PNRLWVRKLL KGKAVK
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