Gene Phep_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1235 
Symbol 
ID8252333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1453997 
End bp1454677 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content47% 
IMG OID644934888 
Productprotein of unknown function DUF752 
Protein accessionYP_003091513 
Protein GI255531141 
COG category[S] Function unknown 
COG ID[COG4121] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.887893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAA TTACCTTAAC TGCCGATGGC TCAAATACGC TGTACAATGA AACCATTGGC 
GAACATTACC ATTCCAAACA CGGTGCCCTG CAGGAAAGCA AACACGTATT TATTGATGCC
GGCCTACAAC ATGCCCTCAG CTGTTTTCCC GGCCAGGAAA TCAAGGTGCT GGAAATTGGT
TTTGGCACAG GGTTAAACTT TTTGCTGAGT GCCGCCTGGT GTGAAAAACA TCAAACCGCG
CTTAAATACA TTTCACTGGA GGCTTTTCCG CTCACGATAG AAGAACTGGA ATCAACAGGT
TACGATCAGT ACGTACCCGA AAATATATGG AATGGCCTGA CCGGCAACTA CGGAAAAGCC
TTTCAGCAAG CTGTAAACCT TGGTGCAGAT CAGCAGCTCA GGATTGTGCA TACCTACCTT
CACCGCTATG AAACGGACCG TCGGTTTGAC CTGCTCTATT ACGATGCTTT TTCAGTACAG
CACCAGCCTG AAATGTGGAC AGATGAGGTG ATTGCCCATG CCTGCAGTTT TTTAAGGCCA
GGCGGTATTT TTGTTACTTA TGCCATTACC GGTAAGCTTA AACGTGCCCT GAAGGCCATT
GGGTTCAGCA TAGAAAAACT GCCCGGCGCT CCCGGAAAAA GAGAGATGTT AAGGGCAACA
AAAGGCGGGT TCGGTTGTTA A
 
Protein sequence
MNRITLTADG SNTLYNETIG EHYHSKHGAL QESKHVFIDA GLQHALSCFP GQEIKVLEIG 
FGTGLNFLLS AAWCEKHQTA LKYISLEAFP LTIEELESTG YDQYVPENIW NGLTGNYGKA
FQQAVNLGAD QQLRIVHTYL HRYETDRRFD LLYYDAFSVQ HQPEMWTDEV IAHACSFLRP
GGIFVTYAIT GKLKRALKAI GFSIEKLPGA PGKREMLRAT KGGFGC