Gene Reut_A1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A1378 
SymbolmnmC 
ID3611169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp1484119 
End bp1486125 
Gene Length2007 bp 
Protein Length668 aa 
Translation table11 
GC content67% 
IMG OID637690768 
Product5-methylaminomethyl-2-thiouridine methyltransferase 
Protein accessionYP_295592 
Protein GI161611262 
COG category[E] Amino acid transport and metabolism
[S] Function unknown 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCGCG CACTCGAGCC CGCCGAGCCT ATTCTGTCTG CCGAAGGCAC TCCTTATTCT 
CCACGCTACG ACGACGTCTA CCACAGCACG GAAGGCGGCC TGGCGCAGGC GCATTACGTA
TTCCTGGGTG GCAATGGATT GCCGCAAGCC TGGGCGGGGC GCGATCAGTT CGTGATCGTC
GAGACCGGAT TCGGGCAAGG GCTGAACTTC CTGGCGACGT GGCAGGCGTG GCGTAACGAT
CCGCAGCGCT GTCGCCGCCT GCACTTCGTC TCGATCGAAA AACATCCGTT CACGCGCGAG
GGACTGGCGC AACTGCATGC CGGGCTTGCG GATATGTTGC CGCTCGCGCA GCAACTGCAA
GCGGCCTGGC CGGATGCGCT GCCCGGCCTG CATCGGCTCG CGTTCGAGGA TGGCGGAGTG
ACGCTGACAC TGGCCCTCGG AGATATCGAG GCAGTGCTGC CCAAGCTGGT GGCCGGCGCG
GATGCGTTCT ACCTCGATGG CTTTTCTCCG TCGCGCAATG CGGACATGTG GTCGCCGTTG
GTGTTTCGCG GCCTTGCGCG GCTCGCACGG CCGGGAGCCA CGCTGGCGAC CTATACGGCG
GCGGGCTTCG TGCGCCGGGG TCTGCGGGAG GCGGGTTTCG ACGCGCGCAA GGCGCCGGGC
TTCGGTGGCA AGCGGGACAT GACGGTTGCG ACGTTTTGCC CGGTATGGAA GTCGCGGCGG
CATGCGCCGA CTCCTGCGCC GGAATGGAAG GTGCGACACG CTATCGTGAT TGGAGCTGGG
CTTGCGGGCT GTGCCGTGAC GGAACGCCTG GCCTCGCGTG GCTGGCAGGT GACGTTGTTC
GACGTACATG ACGGCCCGGC GCGGCAAACG TCGTCCCATC GTGCGGCTGC GATGCATGCG
CATATCTCGT CCGACGACAG CCTGCTGTCC CGGCTGTCGC GCGCTGGCAA CCAATACGCG
CTGCGTGCCT GGGCCGCGCT TGCTGGTGCG GGTCAACCGG TGGGGTGGCA TGGCTGCGGC
GTGCTGCAGA TCGGCGAGAA CGAAGCAGAA GCCGAGGCGC AGCGCGCTGC GCTCGAAGCA
CTCGGTCTGC CGGAGTCCTT CGTGCGCTGG ATGTCGCCGG GGGAGGCGGC ATCGCAACAC
GGCGCCGGCG TGCCGCGCGG AGGGCTGTGG TTTCCGCAGG GCGGCTGGGT TGCGCCGCCC
GATATCTGCA GTGCTCAGTT GCGCCGCGCG GGCGATGCCG TGCAGTCGAG GTTTGGTACG
CGAGTGGAGC GCATTCGCCG CCGCGACGAC GAATGGGAAG CCATCGACGA AGATGGTGCC
GTCCTGGCTT CGGCGCCCAT TCTTGTGCTG GCCAACGCTC ACGAAGCGCC GCGGCTCGCG
CCGATGCGGC ACCAGGTGAT GCGACGCGTG CGCGGCCAGC TCACCACGCT CGCGCCTGGG
CAAGTGACAG CGCTCGGATC GTGGCCGGAT TGCGTGGTGA CCGGTGCGGG ATACCTGCTG
CCGGTGTCGG AAGATGGCAG CGCGCGGGTG GGTTCGAGCT ATGAAGCCGA CGATGGACCG
CTGGTCGCGC GAACCGAAGT GCATGCGGCA AACCTTGATC GCCTGGCGGG GCTGTTGCCG
CAGGCTGCTG CAGCTGCCGG CAATCTCGAT GCCGCGGCGA TGAGCGGATA TGTCGGCGTG
CGCACAGTGT CACACAACCG CTTGCCGCTG ATTGGCCAGA TGCCGGACGA GGCGGCGGCG
ATAGCGGCGG CTCCGTCACT GCGCGGAGCG CACTTGCGCG ACATTCCAAG GGTGCCAGGG
CTTTACGCAG CGCTTGCCTA CGCGTCACGC GGCCTCACAT GGGCCGCATT GGGCGCGGAG
TTGCTGGCAA GCCAGATCGA AGGCGACCCA CTGCCGCTCG AAGCCGATCT GGTAGACGCC
ATCGACCCGG CGCGCCTGCT GCTGCGTGCA CTGCGTCATG GGCAGGTTGG CCGTGAAGAA
GGGCATTCCA GCGGACTATC AGGGTAA
 
Protein sequence
MSRALEPAEP ILSAEGTPYS PRYDDVYHST EGGLAQAHYV FLGGNGLPQA WAGRDQFVIV 
ETGFGQGLNF LATWQAWRND PQRCRRLHFV SIEKHPFTRE GLAQLHAGLA DMLPLAQQLQ
AAWPDALPGL HRLAFEDGGV TLTLALGDIE AVLPKLVAGA DAFYLDGFSP SRNADMWSPL
VFRGLARLAR PGATLATYTA AGFVRRGLRE AGFDARKAPG FGGKRDMTVA TFCPVWKSRR
HAPTPAPEWK VRHAIVIGAG LAGCAVTERL ASRGWQVTLF DVHDGPARQT SSHRAAAMHA
HISSDDSLLS RLSRAGNQYA LRAWAALAGA GQPVGWHGCG VLQIGENEAE AEAQRAALEA
LGLPESFVRW MSPGEAASQH GAGVPRGGLW FPQGGWVAPP DICSAQLRRA GDAVQSRFGT
RVERIRRRDD EWEAIDEDGA VLASAPILVL ANAHEAPRLA PMRHQVMRRV RGQLTTLAPG
QVTALGSWPD CVVTGAGYLL PVSEDGSARV GSSYEADDGP LVARTEVHAA NLDRLAGLLP
QAAAAAGNLD AAAMSGYVGV RTVSHNRLPL IGQMPDEAAA IAAAPSLRGA HLRDIPRVPG
LYAALAYASR GLTWAALGAE LLASQIEGDP LPLEADLVDA IDPARLLLRA LRHGQVGREE
GHSSGLSG