Gene Avi_3359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3359 
Symbol 
ID7387506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp2779264 
End bp2779923 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content63% 
IMG OID643652234 
Producthypothetical protein 
Protein accessionYP_002550418 
Protein GI222149461 
COG category[S] Function unknown 
COG ID[COG4121] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTATT CCACCGCCTT TGGCGACCAT TTTTACTGCC AGACCGATGG CCGCCTGGAA 
TGCGGCCATG TTTTCCTCGA GGGCAATGAA TTGCCGCAGC GCTGGATCGG CGCGTCTTCT 
TTCCGCATCG GCGAACTGGG TTTCGGCACC GGGCTGAACG CGATGGAAAC CTGGCGTCAA 
TGGCAGGCGA CGCGCCCTCC CAGCGGGCAT CTGACCTTCA TATCCTTTGA GCTTTATCCG 
ATGGCGCGCG CCGATATCGA CCGCGCCCTG TCGCGCTGGC CGCAAATCGA TGCAGAGCGG 
CAAGGCTTGC TGGCGCTCTG GCCGGATGAT CCGCAAGGTC AAGTCCAGCT CGACCTCGAC 
GCCCAGACCC GGCTGATCGT GGTTTGCGGC GATGCGCTGG CCTCGCTGCA AGCCTGGTCC 
GAACCATTCG ACGCCTGGTA TCTCGATGGT TTTGCCCCTT CCCGCAACAG CGCCATGTGG 
TCGCTGGAGC TGATGACGCG GCTCTACCAG CTGACAACGC CCGGCGGCCG CTTCGCCACC 
TATGCCGCCG CCGGTTTCGT ACGCCGCAAT CTGATCGCCG CAGGTTTCAC CGTTGAGCGA 
CGCCCGGGCT TTGCCGGCAA ACGAGAAATG CTATGCGGGA CGAAGACGGA GCCGTCGTGA
 
Protein sequence
MPYSTAFGDH FYCQTDGRLE CGHVFLEGNE LPQRWIGASS FRIGELGFGT GLNAMETWRQ 
WQATRPPSGH LTFISFELYP MARADIDRAL SRWPQIDAER QGLLALWPDD PQGQVQLDLD 
AQTRLIVVCG DALASLQAWS EPFDAWYLDG FAPSRNSAMW SLELMTRLYQ LTTPGGRFAT 
YAAAGFVRRN LIAAGFTVER RPGFAGKREM LCGTKTEPS