| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B2519 |
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| Symbol | mnmC |
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| ID | 6793117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011149 |
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| Strand | + |
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| Start bp | 2451283 |
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| End bp | 2453283 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642776714 |
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| Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
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| Protein accession | YP_002147338 |
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| Protein GI | 197247546 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACAAT ACGCCATACA ACCCGCCACA CTCGAATTTA ACGCTGAGGG TACACCTGTT
TCCCGAGATT TTGATGATGT CTATTTTTCT AATGACAATG GACTCGAAGA GACACGCTAC
GTTTTTCTTG GCGGCAATCG TCTTGCGGAG CGATTTCCCG TACATTCACA TCCATTATTT
ATAGTCGCGG AAAGCGGTTT TGGCACCGGA CTTAACTTCC TGACGCTGTG GCAGGCGTTT
GACAGCTTTC GTTCTGCGCA CCCACAGGCG ACGCTACAAA GGTTACATTT CATCAGTTTT
GAGAAATTCC CGTTAACGCG CGACGATCTG GCGCTGGCGC ACCAACACTG GCCGGAGCTC
GCGCCCTGGG CAGAGCAGCT GCAGGCGCAA TGGCCGCTGC CGCTCCCGGG GTGCCACCGC
CTATTGCTGG ATCGGGGCCG GGTGACGCTG GATTTGTGGT TTGGCGATAT TAATGAGCTG
ACCGACCAAC TGGACGCCAC GCTGAATCAA ACAGTCGACG CCTGGTTCCT CGACGGTTTT
GCCCCGGCGA AAAATCCGGA TATGTGGACG CCAAACCTGT TTAACGCGAT GGCGCGGCTG
GCGCGGCCCG GCGCAACGCT GGCGACGTTT ACCTCGGCGG GTTTCGTCCG TCGGGGATTA
CAGGAAGCCG GTTTTACCAT GCAAAAACGC AAAGGCTTCG GACGTAAACG CGAGATGCTT
TGCGGAGTGA TGGAACAACA CCTCATGCCG ACCCTTTCCG CGCCCTGGTT TTACCGCAGC
GGAAGCGAAA AACGTGAAAC GGCGATCATT GGCGGCGGCA TCGCCAGCGC GCTGTTATCA
CTGGCGTTAC TGCGTCGCGG CTGGCAGGTG ACGCTCTATT GCGCAGATGA TCAGCCCGCC
CAGGGCGCTT CCGGTAATCG ACAGGGCGCG CTTTATCCGC TCCTTAGCAA ACATGACGCC
GCCATTAATC GCTTTTTCCC GACCGCATTC ACCTTTGCCC GTCGCCTGTA TGATGCCCTG
CCCGTCTCTT TTGATCATGA CTGGTGCGGC GTGACGCAGC TCGGATGGGA TGAGAAAAGC
CAGCAGAAAA TCGCCCAGAT GCTGTCCCTG GCGCTGCCCG CCGGACTGGC CTCGGCGCTC
AATGCCGAAG AGGCGGAACA GGCGGTTGGC GTGACGACAC GCTGCGGAGG AATTACCTAT
CCGGAAGGCG GCTGGCTGTG CCCGGAACAA TTAACTCGCG CAGTCATCGC ACTGGCGACC
GAACAGGGTT TACAAACGCG CTTTCGCCAT ACGCTCACGT CGCTCGTTGC GCAGGAGTCG
CGCTGGCAAC TGCGCTTTAC GTCAGGTGAA ACCGCCAGCC ATGAGACCGT CGTTCTGGCG
AACGGCCATC AGATTAACCG TTTTGATCAG ACCCAGCCGC TGCCGGTGTA TGCCGTCGGG
GGGCAGGTCA GTCATATTCC CACCACCCCC GCCCTCTCGG CGTTGCGTCA GGTGTTATGC
TACGACGGCT ATCTGACGCC GCAAAATCCG CATAATCAGC AGCACTGTAT TGGTGCCAGC
TATCACCGGG GCGACGAAAG CACCGTCTGG CGCGAAGAAG ATCAGCGTCA GAACCGACAG
CGTCTGCTTG ACTGTTTTCC GGATGCGAAA TGGGCCACAG AGGTTGACGT TAGCGGCAAC
AGAGCCCGTT GCGGCGTGCG TTGCGCCACC CGCGACCATC TGCCGATGGT GGGCAATGTC
CCGGATTACC ATGCCACGCT GACGCATTAC GCCGATTTAG CCGATAATAA AACGTCGGCG
GCGCCTGCGC CTGTCTATCC GGGTTTATTT ATGCTCGGCG CGCTGGGATC GCGCGGTTTG
TGCTCAGCGC CATTATGCGC AGAAATTCTA GCGGCGCAGA TGAGTAACGA GCCGATTCCA
CTGGATGCCG GTACGCTGGC GGCGTTAAAT CCAAATCGGT TATGGGTGAG AAAGTTATTG
AAGGGAAAAG CGGTGAAGTA A
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| Protein sequence | MKQYAIQPAT LEFNAEGTPV SRDFDDVYFS NDNGLEETRY VFLGGNRLAE RFPVHSHPLF
IVAESGFGTG LNFLTLWQAF DSFRSAHPQA TLQRLHFISF EKFPLTRDDL ALAHQHWPEL
APWAEQLQAQ WPLPLPGCHR LLLDRGRVTL DLWFGDINEL TDQLDATLNQ TVDAWFLDGF
APAKNPDMWT PNLFNAMARL ARPGATLATF TSAGFVRRGL QEAGFTMQKR KGFGRKREML
CGVMEQHLMP TLSAPWFYRS GSEKRETAII GGGIASALLS LALLRRGWQV TLYCADDQPA
QGASGNRQGA LYPLLSKHDA AINRFFPTAF TFARRLYDAL PVSFDHDWCG VTQLGWDEKS
QQKIAQMLSL ALPAGLASAL NAEEAEQAVG VTTRCGGITY PEGGWLCPEQ LTRAVIALAT
EQGLQTRFRH TLTSLVAQES RWQLRFTSGE TASHETVVLA NGHQINRFDQ TQPLPVYAVG
GQVSHIPTTP ALSALRQVLC YDGYLTPQNP HNQQHCIGAS YHRGDESTVW REEDQRQNRQ
RLLDCFPDAK WATEVDVSGN RARCGVRCAT RDHLPMVGNV PDYHATLTHY ADLADNKTSA
APAPVYPGLF MLGALGSRGL CSAPLCAEIL AAQMSNEPIP LDAGTLAALN PNRLWVRKLL
KGKAVK
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