| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2732 |
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| Symbol | mnmC |
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| ID | 6872010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 2611159 |
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| End bp | 2613159 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642785794 |
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| Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
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| Protein accession | YP_002216451 |
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| Protein GI | 198245335 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACAAT ACGCCATACA ACCCGCCACA CTCGAATTTA ACGCTGAGGG TACACCTGTT
TCCCGAGATT TTGATGATGT CTATTTTTCT AATGACAATG GACTCGAAGA GACACGCTAC
GTTTTTCTTG GCGGCAATCG TCTTGCGGAG CGATTTCCCG TACATTCACA TCCATTATTT
ATAGTCGCGG AAAGCGGTTT TGGCACCGGA CTCAACTTCC TGACGCTGTG GCAGGCGTTT
GACAGCTTTC GTTCTGCGCA CCCACAGGCG ACGCTGCAAA GGTTACATTT CATCAGTTTT
GAGAAATTCC CGTTAACGCG CGACGATCTG GCGCTGTCGC ACCAACACTG GCCGGAGCTC
GCGCCCTGGG CAGAGCAGCT GCAGGCGCAA TGGCCGCTGC CGCTCCCGGG GTGCCACCGC
CTATTGCTGG ATCGGGGCCG GGTGACACTG GATTTGTGGT TTGGCGATAT TAATGAATTG
ACCGACCAAC TGGACGCCAC GCTGAATCAA ACAGTCGACG CCTGGTTCCT CGACGGTTTT
GCCCCGGCGA AAAATCCGGA TATGTGGACG CCAAACCTGT TTAACGCGAT GGCGCGGCTG
GCGCGGCCCG GCGCAACGCT GGCGACGTTT ACCTCGGCGG GCTTCGTTCG TCGGGGATTA
CAGGAAGCCG GTTTTACCAT GCAAAAACGC AAAGGCTTCG GACGTAAACG CGAGATGCTT
TGCGGAGTGA TGGAACAACA CCTCATGCCG ACCCTTTCCG CGCCCTGGTT TTACCGCAGC
GGAAGCGAAA AACGTGAAAC GGCGATCATT GGCGGCGGCA TCGCCAGCGC GCTGTTATCA
CTGGCGTTAC TGCGTCGCGG CTGGCAGGTG ACGCTCTATT GCGCGGACGA CCAGCCCGCC
CAGGGCGCCT CCGGTAATCG ACAGGGTGCG CTTTATCCAC TCCTTAGCAA ACATGACGCC
GCCATTAATC GCTTTTTCCC GACCGCATTC ACCTTTGCCC GTCGCCTGTA TGATGCCCTG
CCCGTCTCTT TTGATCATGA CTGGTGCGGC GTGACACAGC TCGGATGGGA TGAGAAAAGC
CAGCAGAAAA TTGCCCAGAT GCTGTCCCTG GCGCTGCCCG CCGGACTGGC CTCGGCGCTC
AATGCCGAAG AGGCGGAACA GGCGGTTGGC GTGACGACAC GCTGCGGAGG AATTACCTAT
CCGGCAGGCG GCTGGCTGTG CCCGGAACAA TTAACTCGCG CAGTCATCGC TCTGGCGACC
GAGCAGGGTT TACAAACGCG CTTTTGCCAT ACGCTCACGT CGCTCGTTGC GCAGGAGTCG
CGCTGGCAAC TGCGCTTTAC GTCAGGTGAA ACCGCCAGCC ATGAGACCGT CGTCCTGGCG
AACGGCCATC AGATTAACCG TTTTGATCAG ACCCAGCCGC TGCCGGTGTA TGCCGTCGGG
GGGCAGGTCA GTCATATTCC CACCACCCCC GCCCTCTCGG CGTTGCGTCA GGTGTTATGC
TACGACGGCT ATCTGACGCC GCAAAATCCG CATAATCAGC AGCACTGTAT TGGCGCCAGC
TATCACCGGG GTGACGAAAG CACCGTCTGG CGCGAAGAAG ATCAGCGTCA GAACCGACAG
CGTCTGCTTG ACTGTTTTCC GGATGCGAAC TGGGCCACAG AGGTTGACGT TAGCGGCAAC
AGCGCCCGTT GCGGCGTGCG TTGCGCAACC CGCGACCATC TGCCGATGGT GGGCAATGTT
CCTGATTACC ATGCCACGCT GACGCATTAC GCCGATTTAG CCGATAACAA AACGTCGGCG
GCGCCTGCGC CTGTGTATCC GGGTTTATTT ATGCTCGGCG CGCTGGGATC GCGCGGTTTG
TGCTCAGCGC CATTATGCGC AGAAATTCTG GCGGCGCAGA TGAGTAACGA GCCGATTCCA
CTGGATGCCG GTACGCTGGC GGCGTTAAAT CCAAATCGGT TATGGGTGAG AAAGTTATTG
AAGGGAAAAG CGGTGAAGTA A
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| Protein sequence | MKQYAIQPAT LEFNAEGTPV SRDFDDVYFS NDNGLEETRY VFLGGNRLAE RFPVHSHPLF
IVAESGFGTG LNFLTLWQAF DSFRSAHPQA TLQRLHFISF EKFPLTRDDL ALSHQHWPEL
APWAEQLQAQ WPLPLPGCHR LLLDRGRVTL DLWFGDINEL TDQLDATLNQ TVDAWFLDGF
APAKNPDMWT PNLFNAMARL ARPGATLATF TSAGFVRRGL QEAGFTMQKR KGFGRKREML
CGVMEQHLMP TLSAPWFYRS GSEKRETAII GGGIASALLS LALLRRGWQV TLYCADDQPA
QGASGNRQGA LYPLLSKHDA AINRFFPTAF TFARRLYDAL PVSFDHDWCG VTQLGWDEKS
QQKIAQMLSL ALPAGLASAL NAEEAEQAVG VTTRCGGITY PAGGWLCPEQ LTRAVIALAT
EQGLQTRFCH TLTSLVAQES RWQLRFTSGE TASHETVVLA NGHQINRFDQ TQPLPVYAVG
GQVSHIPTTP ALSALRQVLC YDGYLTPQNP HNQQHCIGAS YHRGDESTVW REEDQRQNRQ
RLLDCFPDAN WATEVDVSGN SARCGVRCAT RDHLPMVGNV PDYHATLTHY ADLADNKTSA
APAPVYPGLF MLGALGSRGL CSAPLCAEIL AAQMSNEPIP LDAGTLAALN PNRLWVRKLL
KGKAVK
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