Gene Mfla_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_1390 
Symbol 
ID4000861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp1490868 
End bp1492736 
Gene Length1869 bp 
Protein Length622 aa 
Translation table11 
GC content62% 
IMG OID637938296 
Producthypothetical protein 
Protein accessionYP_545499 
Protein GI91775743 
COG category[E] Amino acid transport and metabolism
[S] Function unknown 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.909333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATTTCT CGCGCGAAAG CGGGCTGGAA GAAACGCGCC ATGTGTTTCT CCGCCACAAC 
CAGCTTGCGG AACGCTGGCA GACCATGCAG CAGGACGCAT TCACCATCGT CGAGACCGGT
TTCGGCACCG GGCTCAACTT CCTCTGCGCC TGGCAAATGT GGGAGCACAC CGCACCTTCA
CATGTGCGAC TACACTTCGT CAGTATCGAG AAATTCCCGC TCAGCCATGC CGACCTCGCT
CGCGCATTGG CGTTGTGGCC GGAATTAAGG CAATACAGCA CGGCTTTGCT GGCGCAATAT
CACCAAATCG TCCCGGGCTG GCAAAGGCTG GTGTTTTGCC AGGGGCGCGT GCAACTGACG
TTATTGGTTG GTGATGTGCT CGCATTGCTG CCGCAATTAA GCAGTCATGC CGACGCCTGG
TTTCTGGATG GCTTTGCGCC CTCGCGCAAC CCGGAAATGT GGCAGGAGGC GCTGTTCGAC
AACATGGCGG CTTTCTCGCA CAAGCACACT ACTTTTGCCA CGTTCACCAG CGCAGGCATC
GTCAAGCGCG GGCTGCAGGC GGCCGGGTTC GAGGTGCACA AGGTCGCCGG GCACGGGCGC
AAGCGCGACA TGCTGTGCGG ACGCTTCACG CTAAATGAAC GCCCCGCGAT GCGGGCCGGA
CGCGCCGTCG TCATCGGCGG CGGTATTGCC GGCACCGCCA GCAGCCACAT GCTCGCAGAG
CGCGGCTGGC AAGTGAACCT GGTCGAGCAG GAGCCGGCAC TGGCACAGCA CGCTTCCGGC
AACCCTGTAG GCGTGCTTTA TCCCAAATTG GCGCGCAAGG ATGTGCCATT GGGCCGCCTT
TCGCTCGCGG GTTACTTGCA TAGCCTGCGC CTGTTGCAGC AGCTTGGCCT GGATGCCACC
GCCCATGCGC GTTGCGGCAT GTTGCAACTG GCTTTCGACC AACGCGAGCT GGAGCGTTGC
CAGACCATCG CTGCACAGGG CTTTCCGCCT GAACTGCTGC ATTGGGTCGA TCAGGAACAG
GCCGGCAATA TTGCGGGCAT AGCGTTGCAA TACGGCGCAC TGTACTTTCC CGAAGCCGGC
TGGGTCAGGC CGCGGGCTTA TTGCGAAGCG CTCGCCGGCC ATGCCAACAT CACACGGACA
CTTGCCACGC GCGTCACTGG GCTCAGCCAG CACGGCAACG CCTGGCAGGT ATGGACCGGA
GAACAATTAC TGGACGAGGC GGATATCGTC GTCATCGCTA ATGCCGCGCA GGCTGCCAGC
TTTGTTCAAT CCCGCCACTT GCCTCTGGAA CAGGTGCGCG GGCAGATCAG TCGGCTTCAC
CATGTCGACG GGGCCCCGGT ATTGCATGCC CTGCTGTGCA CGGATGGCTA TATCAGTCCC
TTGATCGATG GCGCCTATTG CCTCGGAGCG ACTTTTGTTC CAGGAGATAC GACGACATCC
GTGCGGGATG AAGAGCACGC GCAGAACCTG GACATGCTCA AGCACATGGC ACCTTCGCTA
TACGATACCC TGATGCCTCA AGCGCCAACA GGACGTGCCG CCGTCCGCTG CACCAGCGTG
GATTACCTGC CATTGGTGGG CCCTGTCCTG GATGCCGCCC TGCTGGAGGC CAGGCCGCCG
CGTTACACTG CCGACCCGGC TTCCAGCCTA CCGTGGCTGC CGGGCCTGTA CGTCAATACC
GGCCATGGTT CCAAGGGGCT CACCACCGCC CCCATCGCGG CGGAAATGCT GGCCTGCGCC
ATCCACCACG AGCCTGCCCC GGTCGATAGC GAACTGCTAG CCGTCCTCGA CCCCAACCGC
TTCGTATTGC GCAAACTGGG ACTGAAGCGC CTGGTGCGCG GCCTGGCCTG CCATCCCCTG
CGCCGATGA
 
Protein sequence
MYFSRESGLE ETRHVFLRHN QLAERWQTMQ QDAFTIVETG FGTGLNFLCA WQMWEHTAPS 
HVRLHFVSIE KFPLSHADLA RALALWPELR QYSTALLAQY HQIVPGWQRL VFCQGRVQLT
LLVGDVLALL PQLSSHADAW FLDGFAPSRN PEMWQEALFD NMAAFSHKHT TFATFTSAGI
VKRGLQAAGF EVHKVAGHGR KRDMLCGRFT LNERPAMRAG RAVVIGGGIA GTASSHMLAE
RGWQVNLVEQ EPALAQHASG NPVGVLYPKL ARKDVPLGRL SLAGYLHSLR LLQQLGLDAT
AHARCGMLQL AFDQRELERC QTIAAQGFPP ELLHWVDQEQ AGNIAGIALQ YGALYFPEAG
WVRPRAYCEA LAGHANITRT LATRVTGLSQ HGNAWQVWTG EQLLDEADIV VIANAAQAAS
FVQSRHLPLE QVRGQISRLH HVDGAPVLHA LLCTDGYISP LIDGAYCLGA TFVPGDTTTS
VRDEEHAQNL DMLKHMAPSL YDTLMPQAPT GRAAVRCTSV DYLPLVGPVL DAALLEARPP
RYTADPASSL PWLPGLYVNT GHGSKGLTTA PIAAEMLACA IHHEPAPVDS ELLAVLDPNR
FVLRKLGLKR LVRGLACHPL RR