Gene Pden_2336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2336 
Symbol 
ID4579389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2333413 
End bp2334069 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content71% 
IMG OID639769666 
Producthypothetical protein 
Protein accessionYP_916123 
Protein GI119385067 
COG category[S] Function unknown 
COG ID[COG4121] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0305292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGGC CCGACCAGAG CAGCGCCGAT CTGGACTGGC GCGACGAGGC GATCCCCGTC 
TCGCGCCGTT TCGACGACCC CTATTTCAGC CTGAACGGCG GGCTGGACGA GACGCGCCAT
GTCTTCCTGG CCGGCAACGA CCTGCCCCAG CGGCTGCAGC CCGGCTTTCA TGTCGCGGAA
CTGGGCTTCG GCACCGGGCT GAACCTGCTG GCGCTGGCGC AAATCGCCAT GGTGCCGATC
CGCTTCACCA GTTTCGAAGC CTTCCCGATG AGCGTCGCAG AGCTTGCGCG CGCCCATGCC
GCCTTTCCCG AACTGGAACC GCTGGCGCGG CAGTTGCGCG ACGAATGGCC GCAACGGCGC
TTCACCCTGG GCACGGTCGC GGCCGAGATC GTCGAGGCCG ACGCCCGCGA GGCGCTGCCC
CGCTGGGATG GCCGCGCCGA TGCCTGGTTC CTCGACGGTT TCTCGCCCGC CAAGAACCCC
GAGCTTTGGG GCGAGGCGCT GATGGCCGAG GTGGCGGCCC ATACCACGCC CGGCGGCACG
TTCGCGACCT ATACTGCGGC GGGCCACGTG CGGCGGGCGC TGGCGGCGGC GGGCTTCACG
GTCAGCCGCG CCCCGGGCTT CGCCGGCAAG CGCCACATGA GCCGCGGCCG GCTCTAG
 
Protein sequence
MQRPDQSSAD LDWRDEAIPV SRRFDDPYFS LNGGLDETRH VFLAGNDLPQ RLQPGFHVAE 
LGFGTGLNLL ALAQIAMVPI RFTSFEAFPM SVAELARAHA AFPELEPLAR QLRDEWPQRR
FTLGTVAAEI VEADAREALP RWDGRADAWF LDGFSPAKNP ELWGEALMAE VAAHTTPGGT
FATYTAAGHV RRALAAAGFT VSRAPGFAGK RHMSRGRL