Gene Swoo_4256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4256 
Symbol 
ID6118611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand- 
Start bp5157649 
End bp5158332 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content44% 
IMG OID641635822 
Producthypothetical protein 
Protein accessionYP_001762607 
Protein GI170728581 
COG category[S] Function unknown 
COG ID[COG4121] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000473463 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones4 
Fosmid unclonability p-value0.0000809329 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATAAATA AGATTGAAGT AAAGATGACT AAAGATGGTT CACATACTCT GATGAGCTCG 
CTTTTTGATG ATAGTTACCA TGCCCATAAT GGGGCCATGA GTGAGTCAGA ATATGTGTAT 
ATACAAGCAG GGTTTGAGCA GTTATCTGCT ACGTTTTCAG AGGTTAATAT ATTAGAGCTT 
GGCTTTGGAA CTGGCATGAA TGCCATCTTG ACATTAAGAA GCGCATTAGC CCAAACGGGA 
AGAGTTGAAC GTCCAATTCG CTTTACCAGT ATTGAAGCTT ACCCTATTCC CATGGAACTG 
GTGGAGCAGC TTAACTATAA AGCTGGTTTT ACGCCTGAGA TTGCCGCGCT ATTTGATAAG 
CTGCATCAGG CCCCTTGGGA CTGTGATGTG GAGATCGTGC CAGGTTTTAT GCTGCACAAG 
GTGCACGGGA AGTTACAGTC GTTTACTTCT GCTGAAAACA GCATCAATTT AGTTTATTAC 
GATGCCTTTG CGCCCAGTAA GCAGCCTGAG CTTTGGCAAC AAGATAACTT TGACCGACTT 
TTTCCTATGA TGCAGCAGCA AGCCATGTTG GTTTCCTATT GTGCTAATGG TCAGTTTAAA 
CGAAATTTGA AAGCTTCTGG CTTTACCGTT AAAGCTTATC CTGGTGCGTT GGGACGCCGT 
GAGATGACTC GAGCGTGGAA ATAA
 
Protein sequence
MINKIEVKMT KDGSHTLMSS LFDDSYHAHN GAMSESEYVY IQAGFEQLSA TFSEVNILEL 
GFGTGMNAIL TLRSALAQTG RVERPIRFTS IEAYPIPMEL VEQLNYKAGF TPEIAALFDK 
LHQAPWDCDV EIVPGFMLHK VHGKLQSFTS AENSINLVYY DAFAPSKQPE LWQQDNFDRL 
FPMMQQQAML VSYCANGQFK RNLKASGFTV KAYPGALGRR EMTRAWK