Gene Rfer_3653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3653 
Symbol 
ID3963981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4071015 
End bp4071764 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content63% 
IMG OID637918471 
Producthypothetical protein 
Protein accessionYP_524886 
Protein GI89902415 
COG category[S] Function unknown 
COG ID[COG4121] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACACAC CGCCGCCCGA GCCCGTTGAC TGGCAAGACG ACACCCCGCG CAGCCGCCGC 
TTTGATGATA TTTACCGCGC CCGCTCAAAC GCGCTGGCCC AATCGCGCTC GGTTTTTCTG
GCGGGTTGCG GACTGCCGGA GCGCTGGCGC GACCGGGATC AATTCACCGT GCTGGAGACC
GGATTTGGCC TGGGGCTCAA TTTTTTGACC ACCTGGGCCA CGTGGCTGGC TGACCCACAA
GCCTGCCACA CGCTCAACTT CGTCTCGGTT GAAGCCTATC CGGTGAGTTT TGAAGACATT
TTGCGCAGTA CGCGGGCGCT CGCAACGGCT GCCGACGCCG CCAGCGACCT GGCCGCACAA
ATGCCCTTGC TCGCGCAACA ACTCGCTCTA TTTTGGCCAG GCATCCAACC CGGCCTGAAC
CAGTGCTCGT TGGCGCAAGG TCGCGTTCAA TTGACGCTGT GTGTCGGCGA CGTACTGGCC
ATGCTGCAGC AGTGGCCGGG TCAAGCCGAT GCCGTCTATC TGGACGGCTT CAGCCCCGCA
GTGAACCCTG ACATGTGGTC AAGCGCCACC CTGGGCGCGG TGGCGCAGCA CTGCCACAGC
GGCACCCGGC TTGCCACCTA CACGGTGGCG GCTCAGGTTC GCCGCCGCTT CACCGAGCTC
GGTTTCAGCG TTGAAAAGTG CCCCGGTGTG CCGCCCAAAC GTGACCGGCT ACAGGTGCAT
GTGGCCCATG CGCACTCCAA AACAGACTAA
 
Protein sequence
MHTPPPEPVD WQDDTPRSRR FDDIYRARSN ALAQSRSVFL AGCGLPERWR DRDQFTVLET 
GFGLGLNFLT TWATWLADPQ ACHTLNFVSV EAYPVSFEDI LRSTRALATA ADAASDLAAQ
MPLLAQQLAL FWPGIQPGLN QCSLAQGRVQ LTLCVGDVLA MLQQWPGQAD AVYLDGFSPA
VNPDMWSSAT LGAVAQHCHS GTRLATYTVA AQVRRRFTEL GFSVEKCPGV PPKRDRLQVH
VAHAHSKTD