Gene CHU_0640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0640 
Symbol 
ID4184976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp741978 
End bp742661 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content40% 
IMG OID638070646 
Producthypothetical protein 
Protein accessionYP_677267 
Protein GI110637060 
COG category[S] Function unknown 
COG ID[COG4121] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00000640329 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.493062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACCG ATATCTCACT CATTCTTTCC AGCGACGGTT CACACACCTT ATTCAATCCG 
GTTTTGAATG AAACCTATCA TTCTAAAAAC GGAGCCTTGC AGGAATCCAT TCATGTATAC
ATTGAATATG GCTTACTTGC ATTCAGTGAT CAGAGCGATA TAAACGTACT GGAAATAGGC
TTCGGAACAG GGCTTAACGC ATTGCTTACC TGGAACAAAG CAGAGGAATT ACGATTGAAA
GTAGAATACC ATACACTGGA ACCGTTTCCC TTGAACAAAG AAATTACCGA TCAGTTAAAT
TACCCGGCTC TCATGCACGA ACCGCTGGCA GCAGAGCGCT TTAATAAAAT TCACACCTCT
GCCTGGGAAG AAAAAAATGT ATTGTCTGAA TACTTCACGA TATACAAATA CAAATCAACA
CTCGAAGAAA AATCATTGCC TGTAAACACA TTCGATGTTT GTTACTTCGA TGCCTTTGCA
CCGAACCGGC AGGCTGAAGT GTGGGTTGAA GAGAACTTAA AAAAGATTTT TGACAGTCTG
CTCGAAGGAG GAATTTTGAC AACCTATTGT GCGCAGTCTG CATTTAAGCG TACATTAAAA
ACTGTAGGTT TTGAAGTGGA ATCTAAGAAA GGTCCGTTGT ACAAGAAAGA GATGACGTGG
GGGAGGAAGT TAAATTCCAA ATAA
 
Protein sequence
MSTDISLILS SDGSHTLFNP VLNETYHSKN GALQESIHVY IEYGLLAFSD QSDINVLEIG 
FGTGLNALLT WNKAEELRLK VEYHTLEPFP LNKEITDQLN YPALMHEPLA AERFNKIHTS
AWEEKNVLSE YFTIYKYKST LEEKSLPVNT FDVCYFDAFA PNRQAEVWVE ENLKKIFDSL
LEGGILTTYC AQSAFKRTLK TVGFEVESKK GPLYKKEMTW GRKLNSK