Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0640 |
Symbol | |
ID | 4184976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 741978 |
End bp | 742661 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638070646 |
Product | hypothetical protein |
Protein accession | YP_677267 |
Protein GI | 110637060 |
COG category | [S] Function unknown |
COG ID | [COG4121] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00000640329 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.493062 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAACCG ATATCTCACT CATTCTTTCC AGCGACGGTT CACACACCTT ATTCAATCCG GTTTTGAATG AAACCTATCA TTCTAAAAAC GGAGCCTTGC AGGAATCCAT TCATGTATAC ATTGAATATG GCTTACTTGC ATTCAGTGAT CAGAGCGATA TAAACGTACT GGAAATAGGC TTCGGAACAG GGCTTAACGC ATTGCTTACC TGGAACAAAG CAGAGGAATT ACGATTGAAA GTAGAATACC ATACACTGGA ACCGTTTCCC TTGAACAAAG AAATTACCGA TCAGTTAAAT TACCCGGCTC TCATGCACGA ACCGCTGGCA GCAGAGCGCT TTAATAAAAT TCACACCTCT GCCTGGGAAG AAAAAAATGT ATTGTCTGAA TACTTCACGA TATACAAATA CAAATCAACA CTCGAAGAAA AATCATTGCC TGTAAACACA TTCGATGTTT GTTACTTCGA TGCCTTTGCA CCGAACCGGC AGGCTGAAGT GTGGGTTGAA GAGAACTTAA AAAAGATTTT TGACAGTCTG CTCGAAGGAG GAATTTTGAC AACCTATTGT GCGCAGTCTG CATTTAAGCG TACATTAAAA ACTGTAGGTT TTGAAGTGGA ATCTAAGAAA GGTCCGTTGT ACAAGAAAGA GATGACGTGG GGGAGGAAGT TAAATTCCAA ATAA
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Protein sequence | MSTDISLILS SDGSHTLFNP VLNETYHSKN GALQESIHVY IEYGLLAFSD QSDINVLEIG FGTGLNALLT WNKAEELRLK VEYHTLEPFP LNKEITDQLN YPALMHEPLA AERFNKIHTS AWEEKNVLSE YFTIYKYKST LEEKSLPVNT FDVCYFDAFA PNRQAEVWVE ENLKKIFDSL LEGGILTTYC AQSAFKRTLK TVGFEVESKK GPLYKKEMTW GRKLNSK
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