| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2377 |
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| Symbol | |
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| ID | 4481541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3016117 |
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| End bp | 3018120 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639723125 |
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| Product | hypothetical protein |
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| Protein accession | YP_866283 |
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| Protein GI | 117925666 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.954774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAGC AGCAGGCCCC CAACACAACC GGCATCGGCA CAGCCGACCT ACAATGGCAC
AGCGATGAGA CCCCCTATAG CCCCAGGTTT GACGACATTT ACTACGCCCC CACCCATGGC
GCAGAAGAGT CCACCCATGT CTTTTTAGAG GGGATCAACG CTCCGGCCTG CTGGCAACAA
CGCCCCCACT ATACCCTGGC AGAGACGGGC TTTGGCACCG GTTTAAACTT TTTATTGACC
CTTGATTTAT GGCTGGCCAC CGCCCCCGCC CATGGCCGCC TGCACTATAT TGCCGTCGAA
GCCTACCCCA TGGATCAGGC CGCCCTCGCC CGCGCCCATG CGCCCTTTGC TTGGCTGGCA
CCGCACTCAG CCGCACTGGT GCAAGCGTGG CCCCCAGCGG TGGCCGGTTT TCACCAGCGC
TCCCTCGCCC AAGGGCGCGT CACCCTTACC CTCTTGTTTG GTCCCGCCGC TTCGATGTTG
GCCCAATTGA GCGCGACGGT CGATGGCTGG TATCTGGATG GTTTTGCCCC CAGCCGCAAC
CCAGAGATGT GGAGTGATAC CCTGTTTGCT CAACTCTCCC GCCTAAGTCG GCTCGGCACT
CGACTGGCCA GTTTTACCGT GGCCGGAACG GTTAAACGGG GGCTGCGTGC CCAGGGCTTT
ACCCTGCACA AAGCCCCAGG ATTTGGTCAA AAACGGGAGT GTCTGCGGGG TGTTTTGGAA
AATCCGCTCC CCCATAAACC CAATATTCCC CCTTGGTATG CCCCCCCCCA ACGCAGCGAG
CCTGTAAGCT CTGTCGCGAT CATTGGTGCG GGCATTGCGG GGGCCGCCTG CGCTTACGCC
TGCCGTCGGG CTGGCTTGCA GGTTACACTC TTTGAACGCC ATGCCCAGCC AGGGGCCGAG
GCCTCGGGCA ATCCCTCGGG CCTGTTCAGT CCCCGCCTTA CCGCAGGGGT AAGTCTGGAT
GGGCGCTTTC ATGCCGCAGC CTATTTTCAT GCCCTTGATC TCTATGCCCA ACTGGCCCAA
CACACCCCAG AGATTTACCA CCCAGGCCGT GGCTTGTTGC AGATGGCGGA GAGCGAGGCC
GATGTCCAGC GTTTGCAGCA GGCCCTGTTT CACAGCGCAT GGCCCCCCCA ACATGCCCAA
TGGTGGGATG CCGCTACCGC CAGCCAACAG TTAGGCACGC CCCTGCCCCG TGGTGGCCTA
TGGCATGCTC AGGCGGGGGC GCTTAACCCC AGCGTTCTCT GTGCGGCACT GCTGGCCGAT
GTCACGGCGC ACTACCAGAC AGAGATCGTC CGTCTCGCCC CCCAGCCAGA AGGCTGGACG
CTGCACACCG CCCAACGTCA CTATGGGACA TTTGATGCGG TGGTGATTGC CGCAGGGGCC
ACCGCCCCGC TGCTCTACCC TGAAGCGGAG ATACCCAATA CGGCGGTACA GGGGCAACTG
AGTATTTTGC CTGCGGCCAA CCCACTTAAC CAACATGCCT TGGTGTTTGG TGGCTATCTT
ACCCCGCCCT ATCAGGATGA GCAGGGGCAG CTCTGTCAGG TACTGGGCTC GACCTATCGA
CCATGGGACG ATCTCAGTGA CTGTTCTTGG TCGGAGTGCC AGCCCGAGGC GCACCAGCTC
GTCTGGCAAC AACTTAACGA AACCCTGCCC CAACTGGGTC AGCAGTGGTT AGGCCCCGCC
CGCCAAGGAC GGGCAGCCCT AAGGGCCGCC ATGAAGGACC ATTTTCCTCT GTTTGGCCCC
CTCATAAATC CATCGGCATA TCGAACCAAT TATGCTACCC TGTACCAGGG CAAGCGGGTC
TCCTTGGCGA AACCCGCTGT CTATATTGAC GGACTTTATC TGATCGGCGG CTTGGGCTCA
CGCGGGCTAC TCACAGCCCC CCTGTTTGGG GCGTGCATGG CAGCCCTCTT GAGCGGGGGA
CCGCTACCGC TGGAGGCCGA TCTATGGTGC GCCGTACACC CAGCCCGCCT GCTGGTGCGC
TCATTAAAAA AACCACCGCT TTAA
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| Protein sequence | MSKQQAPNTT GIGTADLQWH SDETPYSPRF DDIYYAPTHG AEESTHVFLE GINAPACWQQ
RPHYTLAETG FGTGLNFLLT LDLWLATAPA HGRLHYIAVE AYPMDQAALA RAHAPFAWLA
PHSAALVQAW PPAVAGFHQR SLAQGRVTLT LLFGPAASML AQLSATVDGW YLDGFAPSRN
PEMWSDTLFA QLSRLSRLGT RLASFTVAGT VKRGLRAQGF TLHKAPGFGQ KRECLRGVLE
NPLPHKPNIP PWYAPPQRSE PVSSVAIIGA GIAGAACAYA CRRAGLQVTL FERHAQPGAE
ASGNPSGLFS PRLTAGVSLD GRFHAAAYFH ALDLYAQLAQ HTPEIYHPGR GLLQMAESEA
DVQRLQQALF HSAWPPQHAQ WWDAATASQQ LGTPLPRGGL WHAQAGALNP SVLCAALLAD
VTAHYQTEIV RLAPQPEGWT LHTAQRHYGT FDAVVIAAGA TAPLLYPEAE IPNTAVQGQL
SILPAANPLN QHALVFGGYL TPPYQDEQGQ LCQVLGSTYR PWDDLSDCSW SECQPEAHQL
VWQQLNETLP QLGQQWLGPA RQGRAALRAA MKDHFPLFGP LINPSAYRTN YATLYQGKRV
SLAKPAVYID GLYLIGGLGS RGLLTAPLFG ACMAALLSGG PLPLEADLWC AVHPARLLVR
SLKKPPL
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