| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4505 |
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| Symbol | mnmC |
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| ID | 4006427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 4847740 |
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| End bp | 4849710 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637949641 |
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| Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
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| Protein accession | YP_560979 |
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| Protein GI | 91785773 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATC CGCTGATCCC CGCCGTCCTC GCTTTTCGCG CCAACGGCAC GCCTTTTTCG
CCGCTCTACG ACGACATCTA TCACAGCGCC GTGGGCGGTC TCGAACAGGC TCACTACGTT
TTCCTGCGCG GCAATGCGCT GCCCGAGCGG TGGCAGGAGC GTCGCGTTTT CACGGTAGTC
GAAACCGGCT TCGGCATGGG CATCAACTTT CTGGTGACCT GGGCCGCGTG GCGCGCCGAT
TCCTCACGCT GCGAGCGGCT CCATTTCGTC TCGACTGAGA AGCATCCGTT TACCGTCGAC
GATTTACGCA AAGTGTATGC GGCGACGATT TCCGATCCGG AGATCGCAGC CTTGGCGCAA
GCGCTCGCGG ATGCCTGGCC GATGCTCGTC CCCGGCACGC ATCGGCTTGA ATTCGAGGAA
GGGCGCGTCG TACTCACGCT CGTTTTTGCC GACGCGCAGG ACAGCGTGCC GGCCTTGAGG
CTGCGCGCCG ATGCGTTCTA CCTCGACGGC TTCGCGCCGG CCAGGAATCC CGAACTCTGG
ACTTCCGCGA TCTTCAAGGC GCTCGCGCGG CTGGCCGGCG AGGGTGCCAC GTTCGCCACC
TACAGCAGTG CCGGCGACAT CAAGCGCGCG TTGACGCAGT GTGGTTTTGA ATACCGCAAG
GTGGACGGCT TCGGCTGGAA ACGCGCGATG CTGGTCGGCC GCTTCGCGCC GCGCTGGCGC
GTGCGCCGTC ATGAGCCACC CGCGCCGCTC GTGGTCGACG AACGGCATGC CGTGGTGATC
GGCACGGGCC TCGCCGGCTG CGCGGTGATC GAGCGGCTGG CCGCGCGCGG CTGGCGCGTC
ACGTCGCTCG AACGGCATGC AGCCGTTGCT CAGGAAGCGT CCGGCAATCC GGCCGGCGTG
TTCCATCCCA TGATTTCCCG TGACGACAGC GTCGCCTCGC GCGTCACGCG GACCGGTTTC
CTGTATTCGC TCAGGCATTG GGCCGCGCTC GAACGGCTCG GCTACGGACC ATCGCGCGGC
AGCAAGGGCC TGTTGCAGAT TGCCGCGGAT GACGAGGAAG CCTTGTCGAT CAGCCAGGCG
ATCGCCGCGG CAAGCTATCC ATCGGAGTAC GTGACCTCCG TCCCGGCAGA CGAAGCTCAA
CGGCTGGCCG GCATGCCGCT CGCGCACGGC GGCTGGTTCT TTCCGTACGG CGGCTGGATC
GATCCTGCAT CGCTCTGCGC CGCGCAGTGC GCCGCGGCAG GTCCGTTGCT CGAACGCCGC
TTCGGGGTGG ACGTCGCGCG GATCGAGCGG GCGGGTGGTC AGTGGATCGT CTTCGACACC
GCGGGTCAGG TTGTCGCGCG TGCGCCGGTG GTGATCGTTG CGAGTGCTCA CGATGCCGCG
CGCATCGCCG GTTTGCAATA CGCGCCGACT CGCAGCATTC GCGGCCAGCT CACGTTATTG
CCGGCCGGCA CGGTGCGGCC GCCGCTCGAG TTGCCGGTGA TCGGCGAAGG CTACGCCGTA
CCGCTTGCCA ACGGCGCCAC GCTGACCGGC GCCACCTATG AACTCGACGA CCCCGACACC
TCGCTTCGCA CGGATGGCCA TCTGGAAAAC CTGGCGCGCG TCGCGCAGAT GTTGCCGGCG
TTTGCGGGCA TCGTCGATCG CGCCGATCCG GCGGCGTTGG CTGGACGTGT CGCGTTCCGT
TGCGTCACCA GCGACCGCAT GCCGATGATC GGCCAGCTCG CCGACGAAAC CGTGGCAGCG
CGCGACGCCC AGCGTCTGCG CGGCGCATGG CCGCTCGATC TGCCGCGCAC AGACGGCCTG
TACGGCGCGT TTGCCTACGG TTCGCGTGGC CTGGTGTGGG CTGCGCTCGG CGCGGAACTG
ATCGCCTCGC AACTGGAAGG CGAACCGTGG CCGCTCGAAC GGGATCTGGC TGAAGACATC
GATCCCGCGC GCTTCCTGTT GCGGGCATTG CGCCAGGGGA CGGTGAGTTG A
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| Protein sequence | MTDPLIPAVL AFRANGTPFS PLYDDIYHSA VGGLEQAHYV FLRGNALPER WQERRVFTVV
ETGFGMGINF LVTWAAWRAD SSRCERLHFV STEKHPFTVD DLRKVYAATI SDPEIAALAQ
ALADAWPMLV PGTHRLEFEE GRVVLTLVFA DAQDSVPALR LRADAFYLDG FAPARNPELW
TSAIFKALAR LAGEGATFAT YSSAGDIKRA LTQCGFEYRK VDGFGWKRAM LVGRFAPRWR
VRRHEPPAPL VVDERHAVVI GTGLAGCAVI ERLAARGWRV TSLERHAAVA QEASGNPAGV
FHPMISRDDS VASRVTRTGF LYSLRHWAAL ERLGYGPSRG SKGLLQIAAD DEEALSISQA
IAAASYPSEY VTSVPADEAQ RLAGMPLAHG GWFFPYGGWI DPASLCAAQC AAAGPLLERR
FGVDVARIER AGGQWIVFDT AGQVVARAPV VIVASAHDAA RIAGLQYAPT RSIRGQLTLL
PAGTVRPPLE LPVIGEGYAV PLANGATLTG ATYELDDPDT SLRTDGHLEN LARVAQMLPA
FAGIVDRADP AALAGRVAFR CVTSDRMPMI GQLADETVAA RDAQRLRGAW PLDLPRTDGL
YGAFAYGSRG LVWAALGAEL IASQLEGEPW PLERDLAEDI DPARFLLRAL RQGTVS
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