Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_0003 |
Symbol | mnmC |
ID | 4882675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 3114 |
End bp | 5240 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640125931 |
Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
Protein accession | YP_001057058 |
Protein GI | 126441676 |
COG category | [E] Amino acid transport and metabolism [S] Function unknown |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) [COG4121] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTCCG CGCGGCTTTC GGGCCGCGCG AACCGGCTTC GCCGCGGCTT GGCCGAAGCC CGCGCGCGGT TTCGTTGGAT TTTGCCAACG CCAGGCGGGA CGGGGCTCTC GCGGCGGTTC GCCGCATTTT CGCCGCCTTC ATTTTTGTTT CGCATGACCG ATCGAATCGT TCCGGCGACG CTCGTCTTCC GCGAGGACGG CACCGTCGTC TCGCCGCTCT ACGGCGACAT CTACCACAGC GCGGCCGGCG CGCTCGCCCA GGCCGACCAC GTGTTCATCC GCGGCAACGG CCTGCCGGAA CGTTGGCGGC ACGAGCGAGC TTTCACGATT ATCGAGACAG GTTTCGGCAC GGGCTGCAAC TTTCTCGCGA CATGGGCTGC ATGGCGTGCG GATCCGTCGC ACTGCGAGCG GCTTCACTTC GTCTCGGTCG AAAAGCATCC GTTCGCGCGC GAAGATCTGC GGCGCGCAGC CGCGCATATC GTTGCATATA CAACTATTAC GCCGATTGCG CCGCTCGTCG ACGAGCTCGC GAACGCATGG CCCGCGCTGA CGCCGGGCGT GCATCGTCTC GAATTCGACG ACGGGCGCGT CACGCTCACG CTCGTGTTCG GCGACGCGCT CGACGTGCTG CCGAACCTCG CGCTGCGCGC GCACGCGTTC TATCTCGACG GCTTCGCGCC GTCGAAGAAC GCGGATTTGT GGTCGCCCGC GATCTTCAAA TCGCTCGCGA AGCTTGCCGA CGAACGCGCG ACGTTCGCGA CCTACACGAG CTCCGGCGCC GTCAAGCGCG CGCTCGACGA AGCGGGTTTC GCGTACCGAA AAGTCGACGG CTTCGCCGGC AAGCGCGCCA TGCTCGTCGG CGAATTCGCG CCGCGCTGGC GCGTGCGCCG CCATGAGCCG CCGCGTGCGT TCAGCACGGA TATACGCGAC GCGATCGTGA TCGGCGCGGG CCTCGCCGGC TGCGCGGTCG TCGAGCGGCT CGCCGCGCGC GGCTGGCACG TGACGCTGAT CGAGCGGCGC GAGCGGATCG CGAGCGAGGC GTCGGGCAAC CCCGCCGGCG TATTCCATCC GATGATCGCG CGCGACGACA ACCTCGCGGC CCGCCTGTCG CGCGCCGGCT TCCTGCACGC GCTGAATCGC TGGCGCGCGC TCGAGCGCGC CGGGCATGCG TTCTCGCGCA GCACACATGG CCTCGTTCAG CTTGCCACGT CGGACAATGA ATTCGAGCGG ATGCGCGAGA GCATCGACGC GCTCGGCGTG CCGGCCGAGC TCGCCTCGGC GCTGTCGCGC GACGACGCGA GAGCGCTGTT GCGAACCGAC GTCGCGCACG GCGGCTGGCT GTTTGCGCAG GGCGGCTCGA TCAGCCCCGC CGCGCTCGCA GCCGCTCAGT GCGCGGCCGC GGGCGACAGG CTTTCGCGCA TCGTCGGCGT CGAGATCGCG CGGCTCGAAC GCGGCGGCGA CGGCCGCTGG CGCGCGCTCG ACGCATCGGG CGCGACGATT GCGCAGGCGA GCGTCGTCGT CGTCGCGAAC GCGGCCGATG CGGCGCGCAT CGCGGGCCTG CGGCATGCGC CGACGCAACG CGTGCGCGGC CAGTTGACGC TGCTGCCGCC GGGCAGCGCG CCCGCCGTGC CGCTGCCCGT GATCGGCGAC GGCTACGTCG TGCCGCTCGC GAACGGCGTC ACGCTGACGG GCGCAACCTA TGAACCGGAC GATACGGATG CGACACCGCG CGAAGCCGGC CATCGCGAGA ACCTCGAGCG GCTCGAACGG CTGCTGCCGG CGTTTTCCGC GAACGCGCTC GATGCGGGCG CGCTCGCGGG CCGCGTCGGC TTTCGCTGCG TCGCGAGCGA CCGGCTGCCG CTCGTCGGCG AGCTCGGCGA CGAGGCGGCG GCCGCGCGCG AGGCGGCGGC GCTGACGGGC GCACGGCTGC GCGACGTGCC GCGCGCGACG GGCCTCTACG GCGCCTTCGG TTACGGCTCG CGCGGGCTCG TCTGGGCGGC GCTCGGCGCC GAGCTGATCG CCGCGCAGAT CGACGGCGAG CCGTGGCCGC TCGAGCGCGA ACTCGCCGAA GCGATCGACC CGGCGCGCTT CCTCGTTCGC GCGCTGCGGC ACGGCCGCGT CGCCTGA
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Protein sequence | MRSARLSGRA NRLRRGLAEA RARFRWILPT PGGTGLSRRF AAFSPPSFLF RMTDRIVPAT LVFREDGTVV SPLYGDIYHS AAGALAQADH VFIRGNGLPE RWRHERAFTI IETGFGTGCN FLATWAAWRA DPSHCERLHF VSVEKHPFAR EDLRRAAAHI VAYTTITPIA PLVDELANAW PALTPGVHRL EFDDGRVTLT LVFGDALDVL PNLALRAHAF YLDGFAPSKN ADLWSPAIFK SLAKLADERA TFATYTSSGA VKRALDEAGF AYRKVDGFAG KRAMLVGEFA PRWRVRRHEP PRAFSTDIRD AIVIGAGLAG CAVVERLAAR GWHVTLIERR ERIASEASGN PAGVFHPMIA RDDNLAARLS RAGFLHALNR WRALERAGHA FSRSTHGLVQ LATSDNEFER MRESIDALGV PAELASALSR DDARALLRTD VAHGGWLFAQ GGSISPAALA AAQCAAAGDR LSRIVGVEIA RLERGGDGRW RALDASGATI AQASVVVVAN AADAARIAGL RHAPTQRVRG QLTLLPPGSA PAVPLPVIGD GYVVPLANGV TLTGATYEPD DTDATPREAG HRENLERLER LLPAFSANAL DAGALAGRVG FRCVASDRLP LVGELGDEAA AAREAAALTG ARLRDVPRAT GLYGAFGYGS RGLVWAALGA ELIAAQIDGE PWPLERELAE AIDPARFLVR ALRHGRVA
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