Gene Coch_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1602 
Symbol 
ID8368048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp1911636 
End bp1912298 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content44% 
IMG OID644984042 
Productprotein of unknown function DUF752 
Protein accessionYP_003141708 
Protein GI256820429 
COG category[S] Function unknown 
COG ID[COG4121] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCACG AACTTATAAA AACCTCTGAT GGCTCTACTA GTCTTTATAT TCCACAGTTA 
GACGAGACCT ATCACTCAGT ACACGGTGCG CTTCAAGAAA CCCAACACGT GTTTATCAAA 
AACGGATTGC AACTGTTTGA CCATCAAAGC ATCTCTATCT TAGAAATTGG CTTTGGTACG 
GGGCTTAACG CTTTGGCTAC TTACAAGGAA CACGAATCCT TGCAACTGAA TATTCGTTAC 
GAAACGGTAG AAGCCTACCC ACTTTCGTGT GACGAAGCCT CGCAAATGAA CTTTCCACAG 
ATGCTCAACG CTCCAGCACT CGTGCCCGTT TTTGAGCAGA TGCACCGTTG TGAGTGGAAC 
AAACTCATTA CCATATTACC CTCTTTTAGT TTCAAAAAGC GATTACAACG TTTTGAAACT 
ATCAACGATA CCGATACTTT CAACCTTATT TATTTCGATG CTTTTGGGGC GCAAGTACAA 
CCTGAATTAT GGCAAGAAGC TATTTTCCAA CGAATGTACA CTGCTCTCAA ACAAGGAGGC 
TATTTGGTAA CCTACGCTGC CAAAGGCTCT GTACGCCGTG CGATGCAAGC TTGTGGCTTT 
ACGGTGGAGC GATTGCCTGG TCCGCCTATG AAAAGGGAAA TGTTACGCGC TCACAAGGAT 
TAA
 
Protein sequence
MTHELIKTSD GSTSLYIPQL DETYHSVHGA LQETQHVFIK NGLQLFDHQS ISILEIGFGT 
GLNALATYKE HESLQLNIRY ETVEAYPLSC DEASQMNFPQ MLNAPALVPV FEQMHRCEWN 
KLITILPSFS FKKRLQRFET INDTDTFNLI YFDAFGAQVQ PELWQEAIFQ RMYTALKQGG 
YLVTYAAKGS VRRAMQACGF TVERLPGPPM KREMLRAHKD