Gene Dfer_3871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3871 
Symbol 
ID8227466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4709464 
End bp4710144 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content53% 
IMG OID644931712 
Productprotein of unknown function DUF752 
Protein accessionYP_003088240 
Protein GI255037619 
COG category[S] Function unknown 
COG ID[COG4121] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.418241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCAAAC TAATAACCGG CCATTTGGAA CGCTTCATCA TTACCGAAGA CGGCTCGCAT 
TCGTTGTTCA GCGCGCAGTT CAATCAGCAA TACCACTCGT TGCAGGGTGC TCTGAATGAA
TCGGAGCATA TTTATATCAA TCTTGGTCTG AGGCCGGTCC TGGAAAATGC TTCCGGGCCG
GTTTCTGTTT TTGAAATGGG TTTCGGCACG GGTTTGAACG CATTCCTCGC CTGGAAACTG
GCCGATCAGC TTCAAAAGCC GGTTTTCTAC ACTTCCGTGG AAGCATATCC CGTTTCTGCA
CTGGAAGCAT CGCAGCTCAA CTATGAGGAA GCGACCGGCG AGAGCGGCTT TATGCAGCTG
CACAGCGCGC CGTGGGGTAA GGAGACGGCC ATTTCGCCAT TTTTTACCCT TCGAAAAGAC
AACACGACGT TGCAGGATTT TACTGCGGAA CGGCTTTTTG ACGTCGTCTT CTACGACGCG
TTCGACCCGC GGGCCCAGCC CGAGCTCTGG ACCGGAGAAA TTTTCACGAA AATAGCAGCC
CAAACGCGGC ACGAAGGCGT ATTAGTAACA TATTCGTCCA AAGGCATCGT TAAAAGGGCA
TTGGCCGCCG GCGGTTTCAA AGTCGAGCGG CACAAAGGCC CGGGCCGGAA AACACACGTG
CTCAAAGCGA TCAAAATCTG A
 
Protein sequence
MAKLITGHLE RFIITEDGSH SLFSAQFNQQ YHSLQGALNE SEHIYINLGL RPVLENASGP 
VSVFEMGFGT GLNAFLAWKL ADQLQKPVFY TSVEAYPVSA LEASQLNYEE ATGESGFMQL
HSAPWGKETA ISPFFTLRKD NTTLQDFTAE RLFDVVFYDA FDPRAQPELW TGEIFTKIAA
QTRHEGVLVT YSSKGIVKRA LAAGGFKVER HKGPGRKTHV LKAIKI