Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1076 |
Symbol | |
ID | 8806836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 1138299 |
End bp | 1140158 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | protein of unknown function DUF752 |
Protein accession | YP_003460324 |
Protein GI | 289208258 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.506712 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCCCG TACATTCTCC TGCTATCCCG TGTGAACCAC TGACGCAGGC GCACCTCGTC TGGCGCGACG GGCGCCCGTA CGCACCCGAA TACCAGGACG CCTATTTTGG TTCGGACGAT CCCAGCGCCG AGGCCTTCGA GGTCTTCATC CAGGCCAACG ACCTCCCGCG CCGATTTGCC GCCGGCGGAA CGGTTGCCAT CGGAGAAACC GGTTTTGGTA CAGGCCTCAA CGTCCTGCTG ACGCTGCAAC AGTGGCGGCA ACACGCGCCG CCCGGTGCCT TCCTGTCGAT ACTGAGCCTG GAAGCCCACC CATTGTCGCT CGACGATCTG CGGGAGGTCC ATCGGCACCT GGACCTGGAC GACGCAGACA GCCAGGCCCT GTGCGCGCAG TATCCGCCGC CGATCAGCGG CCTGCACCGA ATTGTGTTCC CCGGAGCCCG GGCCATCCTG ACGCTCGGTC TGGGCGATGC CGCCCCCCTG CTGGCGCAGA TCCGCGGCGG TATCGATGCC TGGTTCCTGG ACGGTTTCGC GCCGCGTTCG AACCCGGGCC TGTGGAATAC GGCGGTCTTT CGCCAGATCG CGCGGCTTTC CCACCCGGGT GCCACCTTTG GCACCTATAC CGCGGCCGGT CAGGTACGCC GGGATCTGGA GGCCGTGGGA TTTGCAGTCA AACGCGCCCC GGGACATGGC CAGAAGCGTG AACGCCTGCA AGGCTGCTAT CGCGGAACCG TACCGGACGC GCACAAGCGG CCCCGGGTTG CGGTCATCGG TGCCGGCGTT GCCGGGCTCG CCTCTGCATT TGCATTGCAC AACAGAGGCT GCGAAGTCGG GGTATTCGAC CCTGCCGGCG CCGGGGGCGG CGCGTCCGGA AACCCGGCCG CGGTCCTGTT GCCCAACCCT CACCCCAAAG ACACGGAGCT GAATCATCTG GCCCTCGCCG GCATGCGCTC GACCCGTGCC CTGCTCGGCG AAATTACCGC ACAAACCGGC ATTGACCCCG TGCTGGCGGA AGGCGTCTCC TTTCATGGCG TCAGCGCCCA TGGCCGCAAG CGGGTGCAGC GCCTGCTGCG CGCAGGGCGG GAGCACACCG GGGCGTTGTT CGAGCCCGAG GGCGGGCCGG ATTCGGGTCC GGAGCCACGT CTGTACTATC CCGGGGGGTG CGGCCTTAAT CTCGCCCGGC TTTGTACGGC CCTCGCGCAG TCGCTCCCGC CTGTGGAGAC CCGCCTGATC ACCGGTCTGC GCCTCACCGA CGAGGGCCTG ATACTGGAAG CCGAACCGGC CGAATCCAAC GCCGATCCTC TCCCATGGGA TCACGTGATC GTCGCAACGG CGGCTTCCGG GTTGCACACC CTGTGCCCGG AGCTGGAACA GGTATCGACC GTTTCCGGGC AAATGACGCG GGTCCGTGCC CCGCTCCCGG ACTGGGGCGG ACAGGTCGCG ACGGGACAGG GGTACTGCAT CCCGCTCGGT CCGGGCGAGG CCTGGATTGG GGCTACGTAT CGGCGGACAC AGATGCCGGA TGCAGCGGAC GCCGCACCCG ACACCACTCC CCGCGCCGAG GACGACCAGC TCAACCTCGA ACACCTGAGC TGGGTTCCCG GACTCGGCGA CCCCGCACAG GTCGAGACGC TGGAACGCTG GGCGGGGACC CGTGCCGTGG TACGCGATCG CTTGCCTCTG GCCGGTGCGA GCCTCCGCGA CCCCCGCCGC CGGATCTGGC TGAATGTGGC CCACGGCTCG CGCGGGCTGC TGTACGCGCC CCTGGCCGCG GAATTGCTGG CTGACCGCCT GCTGGGTCTT CCGGAACCGC TGCTGGACAG CACCTCTGGC CGCCTCGACC CGCAACGCCC CCTCTCCTAG
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Protein sequence | MTPVHSPAIP CEPLTQAHLV WRDGRPYAPE YQDAYFGSDD PSAEAFEVFI QANDLPRRFA AGGTVAIGET GFGTGLNVLL TLQQWRQHAP PGAFLSILSL EAHPLSLDDL REVHRHLDLD DADSQALCAQ YPPPISGLHR IVFPGARAIL TLGLGDAAPL LAQIRGGIDA WFLDGFAPRS NPGLWNTAVF RQIARLSHPG ATFGTYTAAG QVRRDLEAVG FAVKRAPGHG QKRERLQGCY RGTVPDAHKR PRVAVIGAGV AGLASAFALH NRGCEVGVFD PAGAGGGASG NPAAVLLPNP HPKDTELNHL ALAGMRSTRA LLGEITAQTG IDPVLAEGVS FHGVSAHGRK RVQRLLRAGR EHTGALFEPE GGPDSGPEPR LYYPGGCGLN LARLCTALAQ SLPPVETRLI TGLRLTDEGL ILEAEPAESN ADPLPWDHVI VATAASGLHT LCPELEQVST VSGQMTRVRA PLPDWGGQVA TGQGYCIPLG PGEAWIGATY RRTQMPDAAD AAPDTTPRAE DDQLNLEHLS WVPGLGDPAQ VETLERWAGT RAVVRDRLPL AGASLRDPRR RIWLNVAHGS RGLLYAPLAA ELLADRLLGL PEPLLDSTSG RLDPQRPLS
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