Gene Smed_4486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4486 
Symbol 
ID5319178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp971016 
End bp971741 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content63% 
IMG OID640776287 
Producthypothetical protein 
Protein accessionYP_001313219 
Protein GI150376623 
COG category[S] Function unknown 
COG ID[COG4121] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGAA CCGATCCCGG CAAGAGCCCT TCACCCTCGC GGCAAAACCT CGAATGGCAC 
GAGGGCGATA TGCCCTATTC GACGGAATTT GGCGACCATT TTTATTGCCG TACCGACGGA
CGGCTGGAAT GCGGCCATGT CTTCCTTGCC GGCAACGGAC TGCCCGAACG CTGGGGGTCC
GGCGGCGCAA TGACCATCGG CGAACTCGGC TTCGGCACCG GGCTTAATTT CTGCGAGACG
TGGCGACAAT GGAAGCGGGT GCCTGCGCCC CGGAAGTGTC TCCATTTCGT CTCCTTCGAG
CGCTTCCCGA TGCACGCCGG CGAGATCGAC CGTGCGCTGG CACATTGGCC GGAAATCGAC
GAGGAGCGGC AAGCGCTTGT CGCCAATTGG CCGACGGACC CGGTCGCCCG CGTGGACATT
GACTTCACCG CAGAAGTCCG CCTGACCATC GTTATCGGCG CGGCGTTCGG CGGCGTCTCG
ACGTCCCCTC CCAATTTCGA CGCCTGGTAT CTCGATGGAT TCGCGCCCTC GCGCAATCCG
GACATGTGGT CGAAAGAGCT GATGCAGCTG GTATTCGACA GAACCGTCGG CGGCGGCAGC
TTCGCGACCT ATGCCGCGGC CGGCTTCGTA CGGCGCAATC TGGCCGCAGC AGGGTTCGCC
GTCGAGCGTC GCCCCGGTTT TGCCGGAAAG CGAGAGATGT TACGCGGCGT AAAGCCAGCA
ATATGA
 
Protein sequence
MTGTDPGKSP SPSRQNLEWH EGDMPYSTEF GDHFYCRTDG RLECGHVFLA GNGLPERWGS 
GGAMTIGELG FGTGLNFCET WRQWKRVPAP RKCLHFVSFE RFPMHAGEID RALAHWPEID
EERQALVANW PTDPVARVDI DFTAEVRLTI VIGAAFGGVS TSPPNFDAWY LDGFAPSRNP
DMWSKELMQL VFDRTVGGGS FATYAAAGFV RRNLAAAGFA VERRPGFAGK REMLRGVKPA
I