Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4486 |
Symbol | |
ID | 5319178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 971016 |
End bp | 971741 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640776287 |
Product | hypothetical protein |
Protein accession | YP_001313219 |
Protein GI | 150376623 |
COG category | [S] Function unknown |
COG ID | [COG4121] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGGAA CCGATCCCGG CAAGAGCCCT TCACCCTCGC GGCAAAACCT CGAATGGCAC GAGGGCGATA TGCCCTATTC GACGGAATTT GGCGACCATT TTTATTGCCG TACCGACGGA CGGCTGGAAT GCGGCCATGT CTTCCTTGCC GGCAACGGAC TGCCCGAACG CTGGGGGTCC GGCGGCGCAA TGACCATCGG CGAACTCGGC TTCGGCACCG GGCTTAATTT CTGCGAGACG TGGCGACAAT GGAAGCGGGT GCCTGCGCCC CGGAAGTGTC TCCATTTCGT CTCCTTCGAG CGCTTCCCGA TGCACGCCGG CGAGATCGAC CGTGCGCTGG CACATTGGCC GGAAATCGAC GAGGAGCGGC AAGCGCTTGT CGCCAATTGG CCGACGGACC CGGTCGCCCG CGTGGACATT GACTTCACCG CAGAAGTCCG CCTGACCATC GTTATCGGCG CGGCGTTCGG CGGCGTCTCG ACGTCCCCTC CCAATTTCGA CGCCTGGTAT CTCGATGGAT TCGCGCCCTC GCGCAATCCG GACATGTGGT CGAAAGAGCT GATGCAGCTG GTATTCGACA GAACCGTCGG CGGCGGCAGC TTCGCGACCT ATGCCGCGGC CGGCTTCGTA CGGCGCAATC TGGCCGCAGC AGGGTTCGCC GTCGAGCGTC GCCCCGGTTT TGCCGGAAAG CGAGAGATGT TACGCGGCGT AAAGCCAGCA ATATGA
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Protein sequence | MTGTDPGKSP SPSRQNLEWH EGDMPYSTEF GDHFYCRTDG RLECGHVFLA GNGLPERWGS GGAMTIGELG FGTGLNFCET WRQWKRVPAP RKCLHFVSFE RFPMHAGEID RALAHWPEID EERQALVANW PTDPVARVDI DFTAEVRLTI VIGAAFGGVS TSPPNFDAWY LDGFAPSRNP DMWSKELMQL VFDRTVGGGS FATYAAAGFV RRNLAAAGFA VERRPGFAGK REMLRGVKPA I
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