| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1796 |
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| Symbol | |
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| ID | 4673170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1863853 |
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| End bp | 1865772 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639838884 |
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| Product | hypothetical protein |
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| Protein accession | YP_986060 |
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| Protein GI | 121594164 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAC CGATTGAATG GCTGGAAGAC GGCACGCCCT ACAGCCCGCG CTTCTCAGAC
CGGTACCACA GCGAGCACGG CGGCCTGGAA CAAGCCCGCG GCACATTTCT CGCCGGCTGC
GGCCTGCCCC AGGCCTGGCA GAACCAGCCG CAGTGGCGGG TGCTGGAAAC CGGCTTCGGC
CTGGGCCTGA ATTTCCTCGT GACCTGGGCT GCCTGGCGCG CCGACCCCCA CCGGCCACAG
CGGCTGCACT TCGTTTCTTG CGAGGCCTGG CCCGTGAGCG CGGCCGATCT GCTGCGCGCC
GCGCCCATCG ATTCCACACT GCAATCGCTG GCCCAGCAGT TGGCGGCGCA GTACTGGGGC
TTGCTACCGG GCGTGCACCG GCTCTCGTTC GACGGCGGGC AGGTGCTGCT CACGCTGTAC
ATCGGTGACG CGCAAGCCCT GCTGAGGCAG CAGCAGCCCA CGGCGGATTC GGTGTACCTG
GACGGCTTCG ACCCCCAGCA CAACCCGCAA ATGTGGGACA TCCACACCCT CAAGGCCGTG
GCGCGCTGCT GCCGTCGCGG CACCCGCCTG GCGACGTGGA CGGTGGCGCG CGGCGTGCGG
GACGGGCTGG TGCAGTGCGG CTTCGAGGTG CAAAAGGTGC CAGGTGTCCG CCCCAAGCGC
GACAACCTGC AGGCCACCTA CGCGCCCCGC TGGGAGCCAC GCGCCGGCCA GCCCGTGCTG
CCAGACGCCA CGGTGGCCGC CCCGGCCCGC TGCCTGGTGG TGGGCGCAGG ACTGGCGGGC
GCCGCCGTGG CGGCCAGCCT GGCGCACCGT GGCTGGCAGG TCCAGGTGCT GGACCGGGCC
GATCACCCTG CCGCCGGTGC ATCCGGCCTG CCGGCGGGGG TGTTCGCGCC CAATGTCTCG
CAGGACGACA ACCTGATCTC GCGCCTGTCG CGCGCGGGCG TACGCATCAC GCTGAATACG
CTGGCGCAGC TTCCCGCCGA GACGCGCGGC ACCGACTGGA GCGCGTGCGG CACGCTGGAG
CACCGTGTGG ACGGCACCAC AGGATTGGCC TGGAGCGACG GGCCTGGCCT GGACTGGAGT
CGCCCCGCAA CACCCGCACA ACTGCAGGCC AACGGCTTAT CGGCAGACAC GGTGGCCTGC
TGGCACGAGC ACGCGGGCTG GGTACGCCCG CCCCAGCTCA TCGCCCACCT GCTGAACGAC
CCGGCCATCC GCTGGCGCGG CAGCGCGGCG GTGGCGGAGT TGCGCCGCAC CACCGTCGAC
GGCCAGCCCC TCTGGCAGGC ACTGGACGCC GAAGGGCACG TCCTGGCCGA GGCGGAACTT
GCCGTGGTCT GCGCCGGGCA CCACACCGGC CCGCTCACGC ACGCGCATTG GCCCATGAAT
CCGCTGCGCG GCCAGTTGGC CTGGGGCCTG CATGCCCAGG CCCCCGCCGG CGCCCCGTGG
CCGCCCCAGC CGCTCAATGG CAACGGCAAC CTGGTGCCCC GTGTGCCGCT GCAGGACGGC
GCAGGCTGGG TGCTGGGCTC CACGTTCGAG CGCCTGAAGA CCGCCCTGCC CCCCAGCCCT
GACGACCACG CCAAGGGCTT GGCCACCAAT CAGGCCAAAC TGCACGCGCT GCTGCCCCCC
CTGGGCGCAG CCATGGACGC CGCCTTCTCC CAGGCCGCCA CCGCGCCGGA CGGCCCCGTG
CGCACCTGGG CGGCCGTGCG CTGCGGCGCG CTGGACCGCC GCCCCATCGT GGGGCCTGTG
GACTCGGTGC GCCAGCCCGG CCTGTGGCTG TGCACCGCCA TGGGCGCGCG CGGGCTCACG
CTGTCATTGC TGTGCGGCGA ACTGATCGCC GCGCGGCTGC ACAGTGAGCC CCTGCCGCTG
GACGCCCCTC TGGCGCGCGC GTTGAGCAGC GAGCGCTGGC TAGGGTATGA GCCACAGTGA
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| Protein sequence | MSEPIEWLED GTPYSPRFSD RYHSEHGGLE QARGTFLAGC GLPQAWQNQP QWRVLETGFG
LGLNFLVTWA AWRADPHRPQ RLHFVSCEAW PVSAADLLRA APIDSTLQSL AQQLAAQYWG
LLPGVHRLSF DGGQVLLTLY IGDAQALLRQ QQPTADSVYL DGFDPQHNPQ MWDIHTLKAV
ARCCRRGTRL ATWTVARGVR DGLVQCGFEV QKVPGVRPKR DNLQATYAPR WEPRAGQPVL
PDATVAAPAR CLVVGAGLAG AAVAASLAHR GWQVQVLDRA DHPAAGASGL PAGVFAPNVS
QDDNLISRLS RAGVRITLNT LAQLPAETRG TDWSACGTLE HRVDGTTGLA WSDGPGLDWS
RPATPAQLQA NGLSADTVAC WHEHAGWVRP PQLIAHLLND PAIRWRGSAA VAELRRTTVD
GQPLWQALDA EGHVLAEAEL AVVCAGHHTG PLTHAHWPMN PLRGQLAWGL HAQAPAGAPW
PPQPLNGNGN LVPRVPLQDG AGWVLGSTFE RLKTALPPSP DDHAKGLATN QAKLHALLPP
LGAAMDAAFS QAATAPDGPV RTWAAVRCGA LDRRPIVGPV DSVRQPGLWL CTAMGARGLT
LSLLCGELIA ARLHSEPLPL DAPLARALSS ERWLGYEPQ
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