| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_0866 |
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| Symbol | |
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| ID | 5898321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | - |
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| Start bp | 921034 |
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| End bp | 922839 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641561349 |
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| Product | tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC |
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| Protein accession | YP_001682495 |
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| Protein GI | 167644832 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.205507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC CCACCGCCTC CCCCCTGATC TGGCGCGACG ACGGCATGCC CCAGTCGGCG
CTGTACGGCG ACGTCTATTT CTCCAGCGCC GACGGCCTGG CCGAGACCCG CGCGGTCTTC
CTGGCCGGCT GCGACCTGCC GGCCGCCTGG GCGGGCCGCG ACCATTTCAC CGTCGGCGAA
CTGGGCTTCG GCACCGGCCT GAACATCGCC GCCCTGCTCG ACCTCTGGCG GCGCGAGAAG
GCGCCCCACT CCATGCAGGG GGGGCAGCGC CTGCACATCT TCTCGATCGA AGCCCATCCG
ATCACCCGCG ACGAGGCGGC GCGCGCGCTC GCCGTGTGGC CGGAGCTGGG CGAGGCGGCG
AGCGTGCTGC TCGACCACTG GCCAGGCCTG GCGCGCGGCT TCCATCGCAT CGACCTGCCG
GGCTTCGACG CCACCTTCGA CCTGGCGGTG ATGGACGTCG AGCCGGCCCT GGCGGCCTGG
GACGGCGCGG CGGACGCCTG GTTCCTCGAC GGCTTCTCCC CGGCCCTCAA CCCGGCCATG
TGGCGCGAGG AGATCCTGGC CGCCGTGGCC GCCAGAAGCG CTCCCGGCGC GCGCGCCGCC
ACCTTCACCG TCGCCGGCGC AGTGCGGCGC GGCCTGTCCG CCGCCGGCTT CCAGGTCGAC
AGGCGCCCGG GCTTCGGCCG CAAGAAACAG CGGCTGGAGG CGGTGGCGCC CGGCGTCGCG
GCGTCGCCCC CGCGACCGCG CCGCCTGGCG GTGATCGGCG GCGGCATCGC CGGCGCCGCC
ATGGCCCGCG CCGCTCGCGC CGAGGGCCTG GAGGCGATGA TGTTCGACGA CGGGCAGGCG
CCGGCCTCGG GCAATCCCGC CGCCCTGGTC ACGCCCGCCC TGGACGCTGG CGGCGGCCCC
CGCGCCGCCC TGCCCGCCCA GGCCTTCGCC CGCGCCGCGG CCCTCTACGA AGCCCTGCCC
GAGGCGGTGA TCGCCCGCGG GGCGCTGAAA CTGTCGGTCG TGCCGCGCGA CGAGGCCCGC
CATGCCGCCG TCGCCGACCA GGACCTGTTC GAACCCGGAA CCATGGCGGT GCTCGACGCC
GCGACCGCCA CGGCGCGACT GGGCGAGCCG GTCGGAGAAG CCCTGTCGAT GTCGCAGGCC
CTGGTGGTGG AGCCGGCCCG GGTGCTCGAC GCCTGGCGGG GCGAGGTGAT CGACGCCCAG
GTCGCCCGGC TGGCGCACGA AGATGGGGTC TGGCGCCTGC TGGGATCTGA CGACCAGCTC
CTGGCCGAGG TCGACGCCGT GGTCCTGGCG GGCGGCGCCG GCCAGGCGCG GCTCTGGCCC
GACGCCCCGC TGCGGCCGAT TCGCGGCCAG ACCAGCTGGA CGGACCGACC GCTCGCCTTT
CCGACGCCCG CCGCCTTTGG CGGCTATGTC GCGCCCACCC GCGACGGGAT GCTGTTTGGG
GCCACCCACG ATCGTGACGA CGTGGGGACC GACGCTCGCG CCGAAGATGA CCGCCGCAAT
CTGCGGGCCT TGGCCGAGGG CCTGCCCAAG CTCGCGGCCA GCCTGGCGGA CGCGCCGCTG
CGGGGCCGGG CCGCCGTTCG CGCCACGACC GCCGACCACC TGCCGGTGGC CGGCGCGGTT
CCCGGGGCCG CGCCGGGACT GTTCGTGCTA GGCGGCCTGG GCGGCCGCGG TTTCTGCCTG
GCGCCCCTGC TGGCCGAGCA CCTGGCGGCC CGGATTCTCG CCCTGCCCTC GCCCTTGCCC
CGCCCCCTGT CGGCCCTGGT CGAACCCGGG CGATTTTCGT CGCGCGTCGC GACCGGCGCG
GTATAG
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| Protein sequence | MSDPTASPLI WRDDGMPQSA LYGDVYFSSA DGLAETRAVF LAGCDLPAAW AGRDHFTVGE
LGFGTGLNIA ALLDLWRREK APHSMQGGQR LHIFSIEAHP ITRDEAARAL AVWPELGEAA
SVLLDHWPGL ARGFHRIDLP GFDATFDLAV MDVEPALAAW DGAADAWFLD GFSPALNPAM
WREEILAAVA ARSAPGARAA TFTVAGAVRR GLSAAGFQVD RRPGFGRKKQ RLEAVAPGVA
ASPPRPRRLA VIGGGIAGAA MARAARAEGL EAMMFDDGQA PASGNPAALV TPALDAGGGP
RAALPAQAFA RAAALYEALP EAVIARGALK LSVVPRDEAR HAAVADQDLF EPGTMAVLDA
ATATARLGEP VGEALSMSQA LVVEPARVLD AWRGEVIDAQ VARLAHEDGV WRLLGSDDQL
LAEVDAVVLA GGAGQARLWP DAPLRPIRGQ TSWTDRPLAF PTPAAFGGYV APTRDGMLFG
ATHDRDDVGT DARAEDDRRN LRALAEGLPK LAASLADAPL RGRAAVRATT ADHLPVAGAV
PGAAPGLFVL GGLGGRGFCL APLLAEHLAA RILALPSPLP RPLSALVEPG RFSSRVATGA
V
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