Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3465 |
Symbol | mnmC |
ID | 6970260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 3209579 |
End bp | 3211585 |
Gene Length | 2007 bp |
Protein Length | 668 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643387271 |
Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
Protein accession | YP_002271734 |
Protein GI | 209398413 |
COG category | [E] Amino acid transport and metabolism [S] Function unknown |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) [COG4121] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACACT ACTCCATACA ACCTGCCAAC CTCGAATTTA ATGCTGAGGG TACACCTGTT TCCCGAGATT TTGACGATGT CTATTTTTCC AACGATAACG GGCTGGAAGA GACGCGTTAT GTTTTTCTGG GAGGTAACCA ATTAGAGGCA CGCTTTCCTG AACATCCACA TCCTCTGTTT GTGGTAGCAG AGAGCGGCTT CGGCACCGGA TTAAACTTCC TGACGCTATG GCAGGCATTT GATCAGTTTC GCGAAGCGCA TCCGCAAGCG CAATTACAAC GCTTACATTT CATTAGTTTT GAGAAATTTC CCCTCACCCG TGCGGATTTA GCCTTAGCGC ATCAACACTG GCCGGAACTG GCTCCGTGGG CAGAACAACT TCAGGCGCAG TGGCCAATGC CCTTGCCCGG TTGCCATCGT TTATTACTTG ATGAAGGCCG CGTGACGCTG GATTTATGGT TTGGCGATAT TAATGAACTG ATCAGCCAAC TGGACGATTC TCTAAATCAA AAAGTAGATG CCTGGTTTCT GGACGGCTTT GCGCCAGCGA AAAACCCGGA TATGTGGACG CAAAATCTGT TTAACGCCAT GGCAAGGTTG GCGCGTCCAG GCGGCACGCT GGCGACATTT ACGTCTGCCG GTTTTGTCCG CCGCGGTTTG CAGGAAGCCG GATTCACGAT GCAAAAACGT AAGGGCTTTG GACGCAAACG GGAAATGCTT TGTGGGGTGA TGGAACAGAC ATTACCACTC CCCTGCTCCA CGCCGTGGTT TAATCGTACG GGCAGCAGCA AACGGGAAGT AGCGATTATC GGCGGTGGTA TTGCCAGCGC ATTGTTGTCG CTGGCGCTAT TGCGTCGCGG CTGGCAAGTA ACGCTTTATT GCGCGGATGA AGCCCCCGCG CTGGGTGCTT CCGGCAATCG CCAGGGGGCG TTGTATCCGT TATTAAGCAA ACACGATGAG GCGCTAAACC GCTTTTTCTC TAATGGGTTT ACTTTTGCTC GTCGACTTTA TGATTCATTA CCCGTTAAAT TTGATCATGA CTGGTGCGGC GTCACGCAGT TAGGCTGGGA TGAGAAAAGC CAGCATAAAA TCGCACAGAT GTTGTCAATG GATTTACCCG AAGAACTGGC TGTAGCCGTT GAGGCAAATG CGGTTGAACA AATTACGGGC GTTACGACAA ATTGCAGCGG TATTACTTAT CCGCAAGGTG GCTGGCTGTG TCCGGCAGAA CTGACCCGTA ATGTGCTGGA ACTGGCGCAA CAGCAGGGTT TGCAGATTTA TTATCAATAT CAGTTACAGG ATTTATCCCG TAAGGATGAC TGTTGGTTGT TGACGTTTGC AGGAGATCAG CAAGCGACAC ACAGTGTAGT GGTACTGGCG AACGGGCATC AAATCAGCCG TTTCAGCCAA ACATCGTCTC TGCCAGTGTA TTCGGTTGCC GGTCAGGTCA GCCATATTCC GACGACACCC GAACTGGCAA AACTGAAACA GGTGCTGTGC TATGACGGTT ATCTCACGCC GCAAAATCCG GCGAATCAGC ACCATTGTAT TGGTGCCAGT TATCATCGCG GCAGCGAAGA GACGGCGTAC AGTGAAGACA ATCAGCAGCA GAATCGCCAG CGATTGATTG ATTGTTTCCC ACACGCACAA TGGGCGAAGA CGGTTGATGT CAGTAAAAAA GAGGCGCGCT GCGGTGTGCG TTGTGCCACC CGCGATCATC TGCCAATGGT AGGTAATGTT CCCGATTATG AGGCAACACT CGTGGAATAT GCGTCGCTGG CGGAGCAGAA AGATAAGGCG GTAAGCGCGC CGGTTTTTGA CGATCTCTTT ATGTTTGCTG CTTTAGGTTC GCGCGGTTTG TGTTCTGCCC CGCTGTGTGC CGAGATTCTG GCGGCGCAGA TGAGCGACGA ACCGATTCCG ATGGATGCCA GTACGCTGGC GGCGTTAAAT CCGAATCGGT TATGGGTGCG GAAATTGTTG AAAGGTAAAG CGGTTAAGGC CGGGTAA
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Protein sequence | MKHYSIQPAN LEFNAEGTPV SRDFDDVYFS NDNGLEETRY VFLGGNQLEA RFPEHPHPLF VVAESGFGTG LNFLTLWQAF DQFREAHPQA QLQRLHFISF EKFPLTRADL ALAHQHWPEL APWAEQLQAQ WPMPLPGCHR LLLDEGRVTL DLWFGDINEL ISQLDDSLNQ KVDAWFLDGF APAKNPDMWT QNLFNAMARL ARPGGTLATF TSAGFVRRGL QEAGFTMQKR KGFGRKREML CGVMEQTLPL PCSTPWFNRT GSSKREVAII GGGIASALLS LALLRRGWQV TLYCADEAPA LGASGNRQGA LYPLLSKHDE ALNRFFSNGF TFARRLYDSL PVKFDHDWCG VTQLGWDEKS QHKIAQMLSM DLPEELAVAV EANAVEQITG VTTNCSGITY PQGGWLCPAE LTRNVLELAQ QQGLQIYYQY QLQDLSRKDD CWLLTFAGDQ QATHSVVVLA NGHQISRFSQ TSSLPVYSVA GQVSHIPTTP ELAKLKQVLC YDGYLTPQNP ANQHHCIGAS YHRGSEETAY SEDNQQQNRQ RLIDCFPHAQ WAKTVDVSKK EARCGVRCAT RDHLPMVGNV PDYEATLVEY ASLAEQKDKA VSAPVFDDLF MFAALGSRGL CSAPLCAEIL AAQMSDEPIP MDASTLAALN PNRLWVRKLL KGKAVKAG
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