| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2619 |
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| Symbol | mnmC |
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| ID | 5587831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | + |
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| Start bp | 2612183 |
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| End bp | 2614189 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640926275 |
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| Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
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| Protein accession | YP_001463669 |
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| Protein GI | 157157358 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACACT ACGCCATACA ACCTGCCAAC CTCGAATTTA ATGCTGAGGG TACACCTGTT
TCCCGAGATT TTGACGACGT TTACTTTTCC AATGACAACG GCCTGGAAGA GACGCGTTAT
GTTTTTCTGG GAGGTAACCA ATTAGAGGTA CGCTTTCCTG AACATCCACA TCCTCTGTTT
GTGGTAGCAG AGAGCGGCTT CGGCACCGGA TTAAACTTCC TGACGCTATG GCAGGCATTT
GATCAGTTTC GCGAAGCACA TCCGCAAGCG CAATTACAAC GCTTACATTT CATTAGTTTT
GAGAAATTTC CCCTCACCCG TGCGGATTTA GCCTTAGCGC ATCTACACTG GCCGGAACTG
ACTCCGTGGG CAGAACAACT TCAGGCGCAG TGGCCAATGC CCTTGCCCGG TTGCCATCGT
TTATTGCTCG ATGAAGGCCG CGTGACGCTG GATTTATGGT TTGGCGATAT TAACGAACTG
ACCAGCCAAC TGGACGATTC GCTAAATCAA AAAGTAGATG CCTGGTTTCT GGACGGCTTT
GCGCCAGCGA AAAACCCGGA TATGTGGACG CAAAATCTGT TTAACGCCAT GGCAAGACTG
GCGCGTCCAG GCGGCACGCT GGCGACATTT ACGTCTGCCG GTTTTGTCCG CCGCGGTTTG
CAGGAAGCCG GATTCACGAT GCAAAAACGT AAGGGCTTTG GGCGCAAACG GGAAATGCTT
TGCGGGGTGA TGGAGCAAGC ATTACCCCTC CCCTGCTCCA CACCGTGGTT TAATCGTACG
GGTAGCAGCA AACGGGAAGC GGCGATTATC GGCGGTGGTA TTGCCAGCGC GTTGTTGTCG
CTGGCGTTAT TACGGCGCGG CTGGCAAGTA ACGCTTTATT GCGCGGATGA AGCCCCCGCG
CTGGGTGCTT CCGGCAATCG CCAGGGGGCA TTGTATCCGT TATTAAGCAA ACACGATGAG
GCGCTAAACC GCTTTTTCTC TAATGCGTTT ACTTTTGCTC GTCGGTTTTA CGATTCATTG
CCCGTTAAAT TTGATCATGA CTGGTGCAGC GTCACGCAGT TAGGCTGGGA TGAGAAAAGC
CAGCATAAAA TCGCACAGAT GCTGTCAATG GATTTACCCG CAGATCTGGC TGTTGCAGTC
GGGGCGAATG AGGTTGAAGG CGTTACAGGT GTAGTAACCA ATTGCGGCGG TATTACATAT
CCGCAAGGTG GCTGGTTGTG TCCGGCAGAA CTGACCCGTA GTGTGCTGGA ACTGGCGCAA
CAGCAAGGTT TACAGATTCG TTATCAACAT CAGTTACAGG ATTTATCCCG TAAGGATGAC
GGTTGGTTGT TGAATTTTGC AGGTGATCAG CAAGCGACGC ATAGTGTGGT GGTACTGGCG
AATGGGCATC AAATCAGCCG TTTCAGCCAA ACGTCGTCTC TGCCAGTATA TTCAGTTGCC
GGGCAAGTCA GCCATATTCC GACAACGCCG GAACTGGCAA AACTGAAACA GGTGCTGTGC
TATGACGGTT ATCTCACGCC GCAAAATCCG GCGAATCAGC ACCATTGTAT TGGTGCCAGT
TATCATCGCG GCAGCGAAGA TACGGCGTAC AGTGAGGACG ATCAGCAGCA GAATCGCCAG
CGGTTGATTG ATTGTTTCCC GCAGGCACAG TGGGCAAAAG AGGTTGATGT CAGTGAGAAA
GAGGCGCGCT GCGGTGTGCG TTGTGCCACC CGCGATCATC TGCCAATGGT AGGCAATGTT
CCCGATTATG AGGCAACACT CGTGGAATAT GCGTCGTTGG CGGAGCAGAA AGATAAGGCG
GTAAGCGCGC CGGTTTATGA CGATCTCTTT ATGCTTGCTG CTTTGGGTTC GCGCGGTTTG
TGTTCTGCCC CGCTGTGTGC TGAGATTCTG GCGGCGCAGA TGAGCGACGA ACCGATTCCG
ATGGATGCCA GTACGCTGGC GGCGTTAAAT CCGAATCGGT TATGGGTGCG GAAATTGTTG
AAGGGTAAAG CGGTTAAGGC GGGGTAA
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| Protein sequence | MKHYAIQPAN LEFNAEGTPV SRDFDDVYFS NDNGLEETRY VFLGGNQLEV RFPEHPHPLF
VVAESGFGTG LNFLTLWQAF DQFREAHPQA QLQRLHFISF EKFPLTRADL ALAHLHWPEL
TPWAEQLQAQ WPMPLPGCHR LLLDEGRVTL DLWFGDINEL TSQLDDSLNQ KVDAWFLDGF
APAKNPDMWT QNLFNAMARL ARPGGTLATF TSAGFVRRGL QEAGFTMQKR KGFGRKREML
CGVMEQALPL PCSTPWFNRT GSSKREAAII GGGIASALLS LALLRRGWQV TLYCADEAPA
LGASGNRQGA LYPLLSKHDE ALNRFFSNAF TFARRFYDSL PVKFDHDWCS VTQLGWDEKS
QHKIAQMLSM DLPADLAVAV GANEVEGVTG VVTNCGGITY PQGGWLCPAE LTRSVLELAQ
QQGLQIRYQH QLQDLSRKDD GWLLNFAGDQ QATHSVVVLA NGHQISRFSQ TSSLPVYSVA
GQVSHIPTTP ELAKLKQVLC YDGYLTPQNP ANQHHCIGAS YHRGSEDTAY SEDDQQQNRQ
RLIDCFPQAQ WAKEVDVSEK EARCGVRCAT RDHLPMVGNV PDYEATLVEY ASLAEQKDKA
VSAPVYDDLF MLAALGSRGL CSAPLCAEIL AAQMSDEPIP MDASTLAALN PNRLWVRKLL
KGKAVKAG
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