Gene Dshi_0152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_0152 
Symbol 
ID5711620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp152262 
End bp152954 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content71% 
IMG OID641266047 
Productprotein of unknown function DUF752 
Protein accessionYP_001531502 
Protein GI159042708 
COG category[S] Function unknown 
COG ID[COG4121] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGGCC AGAATTTGGG CCAGATCTCG GGCCAGCGGG CCGAGGTGAC ATGGACCGAG 
GGGGTGCCGG TCTCGGCGCG GTTCGACGAC CCGTATTATT CCAAGGCGGA CGGGCTGGCG
GAGACGCGGC ATGTGTTTGT AGCGGGCAAT GAGCTGCCCG CGCGGTTCGT GCCCGGGTTT
GCAGTGGCGG AGTTGGGGTT CGGTACCGGC CTGACGCTTG CCGTGATGCG GGCGGCCTGG
CGCGGGGCGG GGATTGCCGG GCCCTTGCGA TTCACCAGTT TTGAAGCCTT CCCCATGGCC
GTGCCGGAGA TGCGCGCGGC CCTGGCCACA TTCCCCGGTG TTGCGGCGGA GCTGGCGGAT
GTGTTGGCCG CGCTGGAGGG CGGTGCCGTT GTCGTCGAGG CGGCGGATTT GAGCTTCGAG
CTCGTGCTCG GCGATGCGCG CGAGACGGTA CCGGGTTGGC ACGGGTGTGC GGACGCCTGG
TGCCTCGATG GGTTTTCGCC TGCGAAGAAC CCCGAATTGT GGGAGCCGAC GCTCTTGGCG
GCGGTGGCGG CGCGGACCGC CCCGGGCGGG AGCTTCGCGA CCTACACGGC GGCGGGGGCC
GTGCGGCGCG CGCTGGCCGA GGCTGGGTTC GAGGTGACGC GGGCCCCCGG GTTCGGGCGC
AAGCGGCACA TGAGCCGGGG GCGGCTGCCA TGA
 
Protein sequence
MQGQNLGQIS GQRAEVTWTE GVPVSARFDD PYYSKADGLA ETRHVFVAGN ELPARFVPGF 
AVAELGFGTG LTLAVMRAAW RGAGIAGPLR FTSFEAFPMA VPEMRAALAT FPGVAAELAD
VLAALEGGAV VVEAADLSFE LVLGDARETV PGWHGCADAW CLDGFSPAKN PELWEPTLLA
AVAARTAPGG SFATYTAAGA VRRALAEAGF EVTRAPGFGR KRHMSRGRLP